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Name : pscC (NCGM2_2616) Accession : YP_005980859.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Virulence Product : Type III secretion outer membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 2791489 - 2793303 bp Length : 1815 bp Strand : + Note : similar to GI:116049666; similar to PA14_42350 of P. aeruginosa UCBPP-PA14 DNA sequence : GTGGCGTCCCTGATGCGCCGCCTGCTGATCGGCGGACTGCTGGCGCTGCTGCCTGGCGCGGTCTTGCGCGCGCAGCCGCT GGACTGGCCCAGCCTGCCTTACGACTATGTGGCGCAGGGCGAAAGCCTGCGCGACGTGCTGGCCAACTTCGGCGCCAACT ACGATGCCTCGGTGATCGTCAGCGACAAGGTCAACGACCAGGTCAGCGGTCGCTTCGACCTGGAAAGCCCGCAGGCCTTC CTGCAGTTGATGGCCTCCCTCTACAACCTCGGCTGGTACTACGACGGCACCGTGCTGTACGTATTCAAGACCACCGAGAT GCAATCGCGGCTGGTGAGGCTGGAGCAGGTCGGCGAGGCCGAGCTGAAGCGCGCGCTGACCGCCGCCGGCATCTGGGAAC CGCGCTTCGGCTGGCGTGCCGACCCTTCCGGGCGGCTGGTGCACGTGTCCGGTCCGGGGCGCTATCTCGAACTGGTCGAG CAGACCGCCCAGGTGCTGGAGCAGCAATACACCCTGCGCAGCGAAAAGACCGGCGACCTCAGCGTGGAGATCTTCCCGCT GCGCTATGCGGTCGCCGAGGACCGCAAGATCGAGTACCGCGACGACGAGATCGAGGCGCCGGGCATCGCCAGCATCCTCT CGCGGGTGCTCAGCGATGCCAACGTGGTTGCGGTGGGCGACGAGCCGGGCAAGCTGCGCCCGGGACCGCAATCGAGCCAT GCGGTGGTCCAGGCGGAACCGTCGCTGAACGCGGTGGTGGTGCGCGACCACAAGGACCGGTTGCCCATGTATCGCCGCCT GATCGAAGCCCTCGACCGGCCCTCGGCGCGGATCGAGGTCGGCTTGTCGATCATCGACATCAATGCCGAGAACCTCGCCC AGCTGGGCGTCGACTGGAGCGCCGGGATTCGCCTGGGCAACAACAAGTCGATCCAGATCCGCACCACCGGCCAGGATAGC GAGGAGGGCGGCGGCGCCGGTAACGGGGCGGTCGGCAGCCTGGTGGACAGTCGCGGGCTGGATTTCCTGCTGGCCAAGGT CACCCTGTTGCAGAGCCAGGGGCAGGCGCAGATCGGATCCCGGCCGACCCTGCTGACCCAGGAGAATACCCAGGCGGTGC TCGACCAGAGCGAAACCTACTATGTGCGGGTCACGGGCGAGCGGGTGGCCGAGCTGAAGGCGATCACCTACGGCACCATG CTGAAAATGACACCGCGAGTGGTAACTCTCGGCGATACGCCGGAGATCAGCCTCAGCCTGCACATCGAGGACGGCAGCCA GAAACCCAACAGCGCCGGCCTGGACAAGATCCCCACGATCAACCGCACGGTGATCGATACCATCGCCCGCGTGGGCCATG GCCAGAGCCTGCTGATCGGCGGCATCTACCGCGACGAACTGAGCCAGAGCCAGCGCAAGGTACCCTGGCTCGGCGACATT CCCTATCTCGGCGCGCTGTTCCGCACTACCGCGGACACCGTGCGCCGCTCGGTGCGGCTGTTCCTCATCGAGCCGCGCCT GATCGACGATGGCGTCGGCCATTACCTGGCGCTGAACAACCGTCGCGACCTGCGCGGCGGCCTGCTTGAAATCGACGAGT TGTCGAACCAGAGCCTGTCGTTGCGCAAGCTGCTCGGTAGCGCCCGCTGCCAGGCGCTGGCGCCGGCCAAGGCCGAACAG GAGCGCTTGCGCCAGGCCGGCCAGGGTTCGTTCCTCACGCCCTGCCGGATGGGGGCGCAGGAGGGCTGGCGGGTGACCGA CGGCGCCTGTCCCAAGGACGGCGCCTGGTGCGTCGGCGCGGAGCGCGGGAATTAG Protein sequence : MASLMRRLLIGGLLALLPGAVLRAQPLDWPSLPYDYVAQGESLRDVLANFGANYDASVIVSDKVNDQVSGRFDLESPQAF LQLMASLYNLGWYYDGTVLYVFKTTEMQSRLVRLEQVGEAELKRALTAAGIWEPRFGWRADPSGRLVHVSGPGRYLELVE QTAQVLEQQYTLRSEKTGDLSVEIFPLRYAVAEDRKIEYRDDEIEAPGIASILSRVLSDANVVAVGDEPGKLRPGPQSSH AVVQAEPSLNAVVVRDHKDRLPMYRRLIEALDRPSARIEVGLSIIDINAENLAQLGVDWSAGIRLGNNKSIQIRTTGQDS EEGGGAGNGAVGSLVDSRGLDFLLAKVTLLQSQGQAQIGSRPTLLTQENTQAVLDQSETYYVRVTGERVAELKAITYGTM LKMTPRVVTLGDTPEISLSLHIEDGSQKPNSAGLDKIPTINRTVIDTIARVGHGQSLLIGGIYRDELSQSQRKVPWLGDI PYLGALFRTTADTVRRSVRLFLIEPRLIDDGVGHYLALNNRRDLRGGLLEIDELSNQSLSLRKLLGSARCQALAPAKAEQ ERLRQAGQGSFLTPCRMGAQEGWRVTDGACPKDGAWCVGAERGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscC | AAO18033.1 | LscC | Virulence | TTSS locus | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pscC | YP_005980859.1 | Type III secretion outer membrane protein | VFG0211 | Protein | 0.0 | 99 |
| pscC | YP_005980859.1 | Type III secretion outer membrane protein | VFG0402 | Protein | 0.0 | 64 |
