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Name : popB (NCGM2_2607) Accession : YP_005980850.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Virulence Product : translocator protein Function : - COG functional category : - COG ID : - EC number : - Position : 2785673 - 2786845 bp Length : 1173 bp Strand : + Note : similar to GI:116049658; similar to PA14_42450 of P. aeruginosa UCBPP-PA14 DNA sequence : ATGAATCCGATAACGCTTGAACGCGCCGGACTGCCCTACGGGGTGGCCGACGCCGGGGATATCCCGGCGCTCGGCAGGCC GGTCGCGAGGGATGTCGAGAGTCTGCGGGTGGAGCGCCTGGCGGCGCCGGCCGCGGCTTCCGCGAGCGGCACGGGGGTGG CGCTGACGCCGCCTTCCGCAGCCAGCCAGCAGCGCCTGGAGGTCGCCAATCGTGCGGAGATCGCCAGCCTGGTGCAAGCA GTGGGCGAGGATGCCGGACTGGCGCGGCAGGTTGTGCTGGCCGGCGCTTCGACGCTGTTGTCCGCCGGCCTGATGTCGCC GCAGGCGTTCGAGATCGAGCTGGCGAAAATCACCGGCGAAGTCGAGAACCAGCAGAAGAAACTCAAGCTGACCGAAATCG AGCAGGCGCGAAAGCAGAACCTGCAGAAGATGGAGGACAACCAGCAGAAGATCAGGGAATCGGAAGAAGCCGCGAAAGAA GCCCAGAAGTCCGGTCTGGCAGCCAAAATCTTTGGTTGGATCAGTGCAATAGCTTCGATCATCGTCGGCGCAATCATGGT GGCAACCGGCGTCGGCGCGGCCGCGGGTGCACTGATGATCGCGGGCGGTGTCATGGGAGTGGTCTCCCAGTCGGTACAGC AGGCAGCCGCGGACGGATTGATCAGCAAGGAAGTGATGGAAAAGCTCGGCCCGGCACTGATGGGTATCGAGATCGCCGTC GCGCTGCTGGCGGCGGTGGTCAGCTTCGGCGGCTCAGCGGTCGGCGGGCTGGCCAAGCTGGGCGCGAAGATCGGCGGCAA GGCGGCCGAGATGACCGCCAGCCTGGCGAGCAAGGTCGCCGACCTGGGCGGCAAGTTCGGCAGTTTGGCCGGCCAATCGC TGTCGCACTCGCTGAAACTCGGCGTGCAGGTTTCCGACCTGACCCTGGACGTCGCCAACGGCGCGGCCCAGGCCACTCAT TCGGGATTCCAGGCGAAGGCCGCGAACCGCCAGGCCGACGTGCAGGAATCGCGTGCCGACCTGACCACCCTGCAGGGCGT GATCGAGCGCCTGAAGGAAGAGCTGAGCCGCATGCTGGAAGCATTCCAGGAAATCATGGAGCGGATCTTCGCCATGCTCC AGGCCAAGGGTGAAACCCTGCACAACCTGTCCAGCCGACCGGCAGCGATCTGA Protein sequence : MNPITLERAGLPYGVADAGDIPALGRPVARDVESLRVERLAAPAAASASGTGVALTPPSAASQQRLEVANRAEIASLVQA VGEDAGLARQVVLAGASTLLSAGLMSPQAFEIELAKITGEVENQQKKLKLTEIEQARKQNLQKMEDNQQKIRESEEAAKE AQKSGLAAKIFGWISAIASIIVGAIMVATGVGAAAGALMIAGGVMGVVSQSVQQAAADGLISKEVMEKLGPALMGIEIAV ALLAAVVSFGGSAVGGLAKLGAKIGGKAAEMTASLASKVADLGGKFGSLAGQSLSHSLKLGVQVSDLTLDVANGAAQATH SGFQAKAANRQADVQESRADLTTLQGVIERLKEELSRMLEAFQEIMERIFAMLQAKGETLHNLSSRPAAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lopB | AAO18055.1 | LopB | Virulence | TTSS locus | Protein | 2e-41 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| popB | YP_005980850.1 | translocator protein | VFG0203 | Protein | 6e-110 | 99 |
| popB | YP_005980850.1 | translocator protein | VFG0379 | Protein | 1e-30 | 43 |
