Gene Information

Name : pcrH (NCGM2_2606)
Accession : YP_005980849.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2785186 - 2785692 bp
Length : 507 bp
Strand : +
Note : similar to GI:116049657; similar to PA14_42460 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGAACCAGCAAGCGACCCCTTCCGACACCGACCAGCAACAGGCGCTGGAGGCCTTCCTGCGCGACGGCGGCACCCTGGC
GATGCTTCGCGGACTCAGCGAGGACACCCTGGAGCAGCTCTATGCGCTGGGCTTCAACCAGTACCAGGCGGGCAAGTGGG
ACGACGCGCAGAAGATCTTCCAGGCACTGTGCATGCTCGACCACTACGACGCCCGCTACTTTCTCGGCCTGGGCGCCTGC
CGCCAGTCCCTCGGTCTCTATGAACAGGCCCTGCAGAGCTACAGCTACGGCGCGCTGATGGACATCAACGAGCCGCGCTT
TCCCTTCCATGCCGCCGAGTGCCACCTGCAACTGGGTGATCTCGACGGAGCCGAGAGTGGCTTCTACTCGGCCCGGGCCC
TGGCCGCGGCACAGCCGGCGCACGAGGCCCTGGCCGCGCGTGCCGGCGCCATGTTGGAAGCCGTAACCGCGAGAAAGGAT
CGAACATATGAATCCGATAACGCTTGA

Protein sequence :
MNQQATPSDTDQQQALEAFLRDGGTLAMLRGLSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGAC
RQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQPAHEALAARAGAMLEAVTARKD
RTYESDNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssH AAO18054.1 LssH Virulence TTSS locus Protein 4e-46 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pcrH YP_005980849.1 regulatory protein VFG0202 Protein 3e-58 99
pcrH YP_005980849.1 regulatory protein VFG0380 Protein 5e-41 67