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Name : pcrD (NCGM2_2602) Accession : YP_005980845.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Virulence Product : type III secretory apparatus protein Function : - COG functional category : - COG ID : - EC number : - Position : 2781408 - 2783528 bp Length : 2121 bp Strand : + Note : similar to GI:116049653; similar to PA14_42500 of P. aeruginosa UCBPP-PA14 DNA sequence : ATGAACGACCTGAGCGGGCTTCTCGGCCGGGTCGGCGAGCGCAAGGACATCCTGCTGGTGGTGTTGCTGCTGGCGGTGGT GTTCATGATGGTGCTGCCGTTGCCACCGCTGCTGCTGGACATCCTCATCGCCGTCAACATCACCATCTCCGTGGTCCTGT TGATGATGTCGGTGTACATCGGCTCGCCGTTGCAGTTCTCGGTGTTCCCGGCAGTGCTGCTGATCACCACGCTGTTCCGC CTGGCGCTGTCGGTGAGCACCACGCGGATGATCCTGCTGCAGGCCGACGCGGGGCAGATCGTCAACACCTTCGGCAGCTT CGTGGTCGGCGGCAACCTGGTGGTGGGCATCATCATCTTCCTGATCATCACCATCGTGCAGTTCCTGGTGATCACCAAGG GTGCCGAGCGGGTCGCCGAGGTCAGCGCGCGCTTTTCCCTGGATGCCATGCCGGGCAAGCAGATGAGCATCGACGGCGAC ATGCGTGCTGGCGTGATCGATGTCAACGAGGCGCGGGCGCGGCGCGCGGTGATCGAAAAGGAAAGCCAGATGTTCGGCTC CATGGACGGCGCGATGAAATTCGTCAAGGGCGACGCCATCGCCGGGCTGATCATTATCGTCGTCAACATCCTCGGCGGCA TCGCCATCGGCGTCACGCAGAAGGGCCTGAGCACCGCCGACGCGCTGCAACTGTACGCGGTGCTGACCGTCGGCGATGGC ATGGTCTCGCAGGTGCCGGCGTTGCTGATCGCCATCACCGCCGGGATCATCGTCACCCGGGTGTCTTCCGACGAATCGGC GGACCTCGGCAGCGACATCGGCGAACAGGTGGTGGCGCAGCCCAAGGCGCTGCTGATCGGCGGCCTGTTGCTGGTACTGT TCGGCCTGATTCCCGGTTTCCCGACCCTGACCTTCCTGGCTCTCGCGCTGCTGGTCGGCGGCGGCGGCTATTTCATGCTC TGGCGCCAGCGGCTCCAGGCCAGCGCCGGTTCCCGCGACCTGCCGGCGCTGCTCGCGCAGGGCGCCGGAGCGCCATCGGC CAAGGCGCGCGGCAAGGCTGGCGGCGGCAAGCCGAAGGCCGGGCGTCTCGCCGAGCAGGAAGAGTTCGCCCTCACCGTGC CGTTGCTGATCGACGTCGATGCCAGCCTCCAGGAACGTCTGGAGGCGATGTCGCTGAACGAGGAGCTGGTGCGGGTACGA CGCGCGCTGTACCTGGATTTCGGCGTGCCGTTCCCGGGTATCCACTTGCGCTTCAACGAAGCGATGGGCGATGGCGAATA CCTGGTGCAGCTACAGGAGGTCCCGGTCGCGCGCGGATGCCTGCGGCCGGGCTGGTTGCTGGTGCGCGAACGCGCCGCGC AGCTGGAACTGCTCGCGGTCCCCCACGAGCCGGCGGAGCTGCAGGTGCCGGGAGAAGAGGCGAGCTGGGTGGAGCAGGCG CACCAGGATCGCCTGGAGCGTTCCGGCTGTGCCTGCCTGGGCCTGGAGCAGGTGCTCACCTGGCACCTGTCCCATGTGCT GCGGGAGTACGCCGAGGATTTCATCGGCATCCAGGAGACGCGCTACCTGCTGGAGCAGATGGAGCAGGGTTACGGCGAGC TGGTGAAGGAGGCCCAGCGGATCGTTCCCCTGCAGCGGATGACCGAGATTCTCCAGCGCCTGGTCGGCGAGGACATCTCG ATCCGCAACATGCGGGCGATCCTCGAGGCGATGGTGGAGTGGGGGCAGAAGGAGAAGGACGTGGTGCAGCTCACCGAGTA CATCCGCAGCAGCCTCAAGCGCTACATCTGCTACAAGTACTCCAGCGGCAACAACATCCTTCCCGCCTATCTGCTGGACC AGGCGGTGGAGGAGCAGATCCGCGGTGGCATCCGCCAGACCAGCGCCGGCAGCTACCTGGCCCTCGACCCGGCGATAACC CAGGCCTTCCTCGAGCGCGTGCGGCAGACCGTCGGCGATCTCGCGCAGATGCAGAACCGGCCGGTGCTGATCGTTTCCAT GGATATCCGCCGCTACGTGCGCAAGCTGGTGGAGAGCGACTATGCCGGGCTGCCGGTGCTGTCCTACCAGGAGCTGACCC AGCAGATCAACATCCAGCCGCTTGGCAGGATCGTGTTGTGA Protein sequence : MNDLSGLLGRVGERKDILLVVLLLAVVFMMVLPLPPLLLDILIAVNITISVVLLMMSVYIGSPLQFSVFPAVLLITTLFR LALSVSTTRMILLQADAGQIVNTFGSFVVGGNLVVGIIIFLIITIVQFLVITKGAERVAEVSARFSLDAMPGKQMSIDGD MRAGVIDVNEARARRAVIEKESQMFGSMDGAMKFVKGDAIAGLIIIVVNILGGIAIGVTQKGLSTADALQLYAVLTVGDG MVSQVPALLIAITAGIIVTRVSSDESADLGSDIGEQVVAQPKALLIGGLLLVLFGLIPGFPTLTFLALALLVGGGGYFML WRQRLQASAGSRDLPALLAQGAGAPSAKARGKAGGGKPKAGRLAEQEEFALTVPLLIDVDASLQERLEAMSLNEELVRVR RALYLDFGVPFPGIHLRFNEAMGDGEYLVQLQEVPVARGCLRPGWLLVRERAAQLELLAVPHEPAELQVPGEEASWVEQA HQDRLERSGCACLGLEQVLTWHLSHVLREYAEDFIGIQETRYLLEQMEQGYGELVKEAQRIVPLQRMTEILQRLVGEDIS IRNMRAILEAMVEWGQKEKDVVQLTEYIRSSLKRYICYKYSSGNNILPAYLLDQAVEEQIRGGIRQTSAGSYLALDPAIT QAFLERVRQTVGDLAQMQNRPVLIVSMDIRRYVRKLVESDYAGLPVLSYQELTQQINIQPLGRIVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lssD | AAO18050.1 | LssD | Virulence | TTSS locus | Protein | 0.0 | 80 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pcrD | YP_005980845.1 | type III secretory apparatus protein | VFG0198 | Protein | 0.0 | 99 |
