Gene Information

Name : pcr2 (NCGM2_2599)
Accession : YP_005980842.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : putative type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2780344 - 2780715 bp
Length : 372 bp
Strand : +
Note : similar to GI:116049650; similar to PA14_42530 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGGACTGGGTTGAGCTGGCCGTCGCGCAGTTCTGCCAGGACCTGCGGGTGAGCGTACCGGCGCCGCTGGCGCGCGTGGT
GCAACTGGATTTCGAGGACAGCGGCACCTTGCAGCTGGAACGCCATGGCGAACAGTTGTCGCTCTGGCTGGCCTGTGACC
TGGCCTGGCACCAGGCCTATCGCGGCACCCTGCGGGCGTTGCGCCTGTGCCATGCGCGCGCGGCCGGGAGCCTGCCGCTG
CGTTGCGCCTGGAGCGGCGAATCGCGCCTGCTGCTGTGCATCACCCTGGAAGCCCGGCAGGTCGGCATCCCGACGCTGCA
CCAGGCCTTGCAGGCGCTGCGCTCGGCGCGCAGCGAAGTGCTCGCCGCATGA

Protein sequence :
MDWVELAVAQFCQDLRVSVPAPLARVVQLDFEDSGTLQLERHGEQLSLWLACDLAWHQAYRGTLRALRLCHARAAGSLPL
RCAWSGESRLLLCITLEARQVGIPTLHQALQALRSARSEVLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssN AAO18047.1 LssN Virulence TTSS locus Protein 9e-23 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pcr2 YP_005980842.1 putative type III secretion protein VFG0195 Protein 4e-44 99
pcr2 YP_005980842.1 putative type III secretion protein VFG0387 Protein 6e-23 48