Gene Information

Name : pcr1 (NCGM2_2598)
Accession : YP_005980841.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : putative protein in type III secretion
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2780079 - 2780357 bp
Length : 279 bp
Strand : +
Note : similar to GI:116049649; similar to PA14_42540 of P. aeruginosa UCBPP-PA14

DNA sequence : 
ATGGCATACGGGCCTTCTGAATTGACCGGCGCAGTCATCGCCTTGCTCGAGAAGCGCTGGGTCGGCGTCGCCGAGGTGCA
GGCGTTGCTCGAGCCGTTGCCGCTGGCCGACGTCGCCCGGCAGATCCATTTCTTCCGCGAACTGAAGCGTCTCTACCGTC
TGTTGCCGGTCGAAGTGTTCGGCGACGACGAGCAGCGCCAGAATCTTTTGAATGCCTGCCAGATGGCACTCGACCTGGCG
ATCGAGCGCGAAGAGGAGCAGCAGCATGGACTGGGTTGA

Protein sequence : 
MAYGPSELTGAVIALLEKRWVGVAEVQALLEPLPLADVARQIHFFRELKRLYRLLPVEVFGDDEQRQNLLNACQMALDLA
IEREEEQQHGLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssA AAO18046.1 LssA Virulence TTSS locus Protein 2e-25 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pcr1 YP_005980841.1 putative protein in type III secretion VFG0194 Protein 1e-38 100
pcr1 YP_005980841.1 putative protein in type III secretion VFG0388 Protein 3e-19 46