Name : popN (NCGM2_2597) Accession : YP_005980840.1 Strain : Pseudomonas aeruginosa NCGM2.S1 Genome accession: NC_017549 Putative virulence/resistance : Virulence Product : Type III secretion outer membrane protein Function : - COG functional category : - COG ID : - EC number : - Position : 2779232 - 2780098 bp Length : 867 bp Strand : + Note : similar to GI:116049648; similar to PA14_42550 of P. aeruginosa UCBPP-PA14 DNA sequence : ATGGACATCCTCCAGAGTTCCTCCGCCGCGCCCCTCGCGCCGCGGGAAGCGGCCAACGCCCCCGCACAGCAGGCCGGCGG CAGCTTCCAGGGCGAGCGCGTCCACTACGTTTCCGTTTCGCAGTCGCTGGCCGATGCCGCGGAAGAGCTGACCTTCGCCT TTTCCGAGCGCGCCGAGAAATCCCTGGCCAAGCGCCGCCTGAGCGACGCCCATGCGCGCCTGAGCGAAGTCCAGGCCATG CTGCAGGAGTACTGGAAGCGCATTCCGGACCTGGAAAGCCAGCAGAAGCTCGAGGCGCTGATCGCCCACCTGGGCAGCGG TCAACTGAGCAGCCTGGCGCAGCTCAGCGCTTACCTGGAGGGCTTCTCCAGCGAGATCAGCCAGCGCTTCCTGGCGCTGT CGCGGGCGCGCGACGTCCTGGCCGGGCGGCCGGAGGCGCGGGCGATGCTGGCGCTGGTCGACCAGGCGTTGCTGCGGATG GCCGACGAGCAGGGCCTGGAGATCGAACTCGGCCTGCGCATCGAGCCGCTGGCCGCCGAGGCTTCCGCCGCCGGTGTCGG CGATATCCAGGCGCTGCGCGATACCTACCGTGACGCGGTACTCGACTACCGGGGCCTGTCGGCGGCCTGGCAGGACATCC AGGCGCGCTTCGCCGCGACGCCGCTGGAGCGGGTCGTGGCCTTCCTGCAGAAAGCCCTGAGCGCCGACCTGGACAGTCAG TCGAGCCGGCTCGATCCGGTGAAGCTGGAGCGGGTCATGAGCGACATGCACAAGCTGCGCGTGCTCGGCGGCCTGGCGGA GCAGGTGGGGGCGCTCTGGCAGGTGCTGGTGACAGGGGAGCGGGGCCATGGCATACGGGCCTTCTGA Protein sequence : MDILQSSSAAPLAPREAANAPAQQAGGSFQGERVHYVSVSQSLADAAEELTFAFSERAEKSLAKRRLSDAHARLSEVQAM LQEYWKRIPDLESQQKLEALIAHLGSGQLSSLAQLSAYLEGFSSEISQRFLALSRARDVLAGRPEARAMLALVDQALLRM ADEQGLEIELGLRIEPLAAEASAAGVGDIQALRDTYRDAVLDYRGLSAAWQDIQARFAATPLERVVAFLQKALSADLDSQ SSRLDPVKLERVMSDMHKLRVLGGLAEQVGALWQVLVTGERGHGIRAF |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
lopN | AAO18045.1 | LopN | Virulence | TTSS locus | Protein | 5e-74 | 63 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
popN | YP_005980840.1 | Type III secretion outer membrane protein | VFG0193 | Protein | 2e-111 | 100 |
popN | YP_005980840.1 | Type III secretion outer membrane protein | VFG0389 | Protein | 8e-50 | 49 |