Gene Information

Name : pscQ (NCGM2_2593)
Accession : YP_005980836.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2775208 - 2776137 bp
Length : 930 bp
Strand : -
Note : similar to GI:116049644; similar to PA14_42610 of P. aeruginosa UCBPP-PA14

DNA sequence : 
ATGAACGGTGCGGACCTCGACCTGCCGCTCGCCAGCCGCGCCGAACTGGATCTCCAGCGACGTCTCGCACGTTGCCGTCG
CCACTATGTCGGCAACGCTTTGCAAGCGCGCCTGGACATCGCCCAGGCCGCCCCCGACGTCGATCTCGAACTGAGCCTGG
CGTGGGACGGCCTGCCCCTGCGCTTTCTCTGCCAGGCCCCGGCGCTGGCCCGCTGGCTCGCGCCGAACCTGCAGGAGGCA
GCCTTCGCCAGCCTGCCGGCGGCCCTGCAACTGGCCTTGCTGGAGCGCGAAGGCAACGTCTTTCCCGGCCTGGTCTGGTA
CGGCCTGAGCCCGGCGCAACCACGCGCTGCGATGGGCCTGCGCCTGAGCCTGGAACGCGACGACCAGCGCCTGGCGCTCT
GGCTCGACGGCGATCCCGCGACGCTGCTGGCACGCCTGCCGCCGCGCCCCTCGGCGCAACGCCTGGCCATACCGCTGCGC
CTGTCGCTGCAATGGCCCGGCCTGCCGCTGGAGGCCGGCGAGCTGCGCACCCTGGAGCCCGGCGACCTGTTGCTGCTGCC
TGCCGGCCATCGCCCCGACGCAGCGCTGCTGGGGGTTCTCGAAGGACGCCCCTGGGCGCGCTGCCAACTCCACTCCACGC
AACTGGAACTGCTCGACATGCACGACATCCCCTCCCTCGCCGACAGCGAGGACCTGCACGAACTCGACCAACTGCCGATC
CCGGTCAGCTTCGAGGTCGGCCGCCGCACCCTGGACCTGCATACCCTCTCCACCCTGCAGCCAGGCTCGCTGCTCGATCT
CGACTGTGCCCTGGACGGCGAAGTGCGCATCCTCGCCAACCAGCGCTGCCTCGGTATCGGCGAACTGGTCAGGCTCCAGG
ACCGGCTCGGGGTGCGCGTAACCCGCCTGTTCGGACACGACGAAGCATGA

Protein sequence : 
MNGADLDLPLASRAELDLQRRLARCRRHYVGNALQARLDIAQAAPDVDLELSLAWDGLPLRFLCQAPALARWLAPNLQEA
AFASLPAALQLALLEREGNVFPGLVWYGLSPAQPRAAMGLRLSLERDDQRLALWLDGDPATLLARLPPRPSAQRLAIPLR
LSLQWPGLPLEAGELRTLEPGDLLLLPAGHRPDAALLGVLEGRPWARCQLHSTQLELLDMHDIPSLADSEDLHELDQLPI
PVSFEVGRRTLDLHTLSTLQPGSLLDLDCALDGEVRILANQRCLGIGELVRLQDRLGVRVTRLFGHDEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscQ AAO18041.1 LscQ Virulence TTSS locus Protein 1e-47 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pscQ YP_005980836.1 type III secretion system protein VFG0189 Protein 9e-114 99