Gene Information

Name : pscT (NCGM2_2590)
Accession : YP_005980833.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : translocation protein in type III secretion
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2773504 - 2774292 bp
Length : 789 bp
Strand : -
Note : similar to GI:116049641; similar to PA14_42640 of P. aeruginosa UCBPP-PA14

DNA sequence : 
ATGAGCGTCCAGGACCTGCAGCAACTGCTGCTGACCTACAGCCTGCTGCTGCCGCGGATCATCAGTTGCTTCGTGGTCCT
GCCGGTGCTGGCCAAGCAGACCCTGGGCGGCGGCCTGGTGCGCAACGGCGTGGCCTGCTCGCTGGCGCTGTTCGCCTACC
CGATCGTCGCCGGCAGCCTGCCGCCGGCCCTCGGCGCGCTGGACATCGCCCTGCTGATCGGCAAGGAAGTGCTGCTCGGC
CTGCTCATCGGCTTCGTCGCCACCATTCCCTTCTGGGCCATGGAAGCGACCGGCTTCATCATCGACAACCAGCGTGGCGC
GGCACTCGCCTCGACCCTCAACCCCAGCCTGGGCAGCCAGACCAGCCCCACCGGGCTGTTGCTGACGCAGACGCTGATCA
CCCTGTTCTTCTCCGGCGGCGCCTTCCTCGCGCTGGTCGGCTCGCTGTTCAGGAGCTATGCCAGTTGGCCGGTGAGCAGT
TTCTTCCCGCAGTTCGGCAGCCAATGGGTGGCATTCTTCTACGCGCAGTTCTCGCAGATGCTGATGCTCTGCGCGCTGTT
CGCCGCGCCGCTGCTGATCGCCATGTTCCTCGCCGAGTTCGGCCTGGCGCTGATCAGCCGCTTCGCCCCGTCGCTGAACG
TGTTCATCCTCGCCATGCCGATCAAGAGCCTGGTCGCCAGCCTGCTGCTGGTGCTCTACCTGGGCATCCTCATGGAGCAC
GCCTACGATGCCCTGCTGCTCGCCGTCGACCCGCTGCGCCTGCTGCGTCCCGTGCTGGAGACGCCATGA

Protein sequence : 
MSVQDLQQLLLTYSLLLPRIISCFVVLPVLAKQTLGGGLVRNGVACSLALFAYPIVAGSLPPALGALDIALLIGKEVLLG
LLIGFVATIPFWAMEATGFIIDNQRGAALASTLNPSLGSQTSPTGLLLTQTLITLFFSGGAFLALVGSLFRSYASWPVSS
FFPQFGSQWVAFFYAQFSQMLMLCALFAAPLLIAMFLAEFGLALISRFAPSLNVFILAMPIKSLVASLLLVLYLGILMEH
AYDALLLAVDPLRLLRPVLETP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscT AAO18038.1 LscT Virulence TTSS locus Protein 1e-59 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pscT YP_005980833.1 translocation protein in type III secretion VFG0186 Protein 1e-67 99
pscT YP_005980833.1 translocation protein in type III secretion VFG0396 Protein 9e-55 73