Gene Information

Name : NCGM2_1414 (NCGM2_1414)
Accession : YP_005979665.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1562901 - 1563827 bp
Length : 927 bp
Strand : -
Note : similar to AA sequence:RefSeq:YP_364101; similar to putative secreted protein [Xanthomonas campestris pv. vesicatoria str. 85-10]

DNA sequence :
ATGAAGCCCATGAAGCATCCTGTGTTCGCGCTGCTGGGGCTGCTGGCCGTGGTCGCAGCACCTGTAGCCCATGCTGTGGA
GATCCTGCGTTGGGAGCGCATGCCGCTGGCGGTGCCGTTGAAGGTCGGCCAGGAGCGCATCGTGTTCATCGACCGAAACG
TCCGCGTGGGCGTGCCTGCGGGCGTCGGTGAGCGACTGCGCGTGCAGAGCGCAGGTGGCGCGATATACCTGCGTGCCAAC
GAGCCGATCGAGCCCACACGGCTGCAATTGCAGGACGCCGACACGGGCGCGTTGATCCTGCTCGACATTGCGGCGGAGCC
GCCCAAGGACGGCGAGGCCGAGCTGGAACCGGTGCGCATCGTCGAGGGCAACAGCACACCAGCGCGCTATGGCGATCAGC
CTGACGGTGTCGATGCGCCCCAGGCGCGCGCCCAGAATCAATCTGACACCCGTATGGCGCGACGCGAAACGCCAATTTCC
GTCGTGCTGACACGCTTTGCCGCACAGAACCTCTACGCGCCGCTGCGCACCGTGGAAGCCTTGCCAGGCGTCATGCGGGT
CAACCTGCGCCGCGACCTCGACCTCGGCACGCTGATGCCGACCTTGCCGGTGCGCGCTGTGGCGCTCGCGTCGTGGCGTC
TGGAAGACCAGTGGGTCACTGCCGTGCGCCTGACCAACAACAGCAGCGACTGGATCAGCCTCGACCCGCGCGTGCTGCAA
GGTGACTTTCTCACCGCCACCTTCCAGCACGAGGCGCTTGGCCCGCGCGGAACCCCCGAGGACACCACCGTCCTGTACCT
GGTGACGCGCGGGCACGGCCTCGCGCAATCGCTGCTGCCGGCGATCCATCGCTTCGACCCCGCTGTGCATCTCCCGCAGC
CCAAAGCAGCAGCCAGCGACGACAGGGAGGCCCGCCATGCGCAGTAA

Protein sequence :
MKPMKHPVFALLGLLAVVAAPVAHAVEILRWERMPLAVPLKVGQERIVFIDRNVRVGVPAGVGERLRVQSAGGAIYLRAN
EPIEPTRLQLQDADTGALILLDIAAEPPKDGEAELEPVRIVEGNSTPARYGDQPDGVDAPQARAQNQSDTRMARRETPIS
VVLTRFAAQNLYAPLRTVEALPGVMRVNLRRDLDLGTLMPTLPVRAVALASWRLEDQWVTAVRLTNNSSDWISLDPRVLQ
GDFLTATFQHEALGPRGTPEDTTVLYLVTRGHGLAQSLLPAIHRFDPAVHLPQPKAAASDDREARHAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 6e-116 88
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-73 65
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 3e-76 59
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 1e-71 58
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-72 58
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-71 57
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 3e-51 50
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 3e-51 50
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 1e-50 48
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 1e-50 48
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 3e-50 47
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 3e-51 47
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 3e-48 42