Gene Information

Name : cat (NCGM2_1372)
Accession : YP_005979623.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1507217 - 1507855 bp
Length : 639 bp
Strand : -
Note : similar to GI:116048613; similar to PA14_55170 of P. aeruginosa UCBPP-PA14

DNA sequence : 
ATGGGCAACTATTTCGAGAGCCCCTTCAGGGGCAAGCTGCTCTCGGAACAGGTCAGCAACCCAAACATTCGGGTGGGGCG
CTACAGCTACTACTCCGGCTACTATCACGGGCATTCCTTCGACGACTGCGCCCGCTACCTGATGCCGGACCGCGACGACG
TGGACAAGCTGGTCATCGGCAGTTTCTGTTCGATCGGCAGTGGCGCCGCCTTCATCATGGCCGGCAACCAGGGACACCGC
GCCGAATGGGCATCGACCTTCCCCTTCCACTTCATGCACGAAGAGCCTGCCTTCGCCGGCGCCGTGAACGGCTATCAGCC
AGCGGGCGACACGCTGATCGGCCATGACGTCTGGATCGGTACCGAGGCGATGTTCATGCCCGGCGTACGGGTCGGCCACG
GAGCCATCATCGGCAGCCGCGCGCTGGTGACCGGCGATGTCGAGCCCTATGCCATCGTCGGCGGTAACCCGGCCCGGACC
ATTCGTAAGCGCTTTTCCGATGGCGATATCCAGAACCTGCTGGAAATGGCCTGGTGGGACTGGCCACTGGCCGATATCGA
GGCAGCCATGCCACTGCTGTGTACTGGGGATATCCCCGCCTTGTACCAGCACTGGAAACAGCGCCAGGCCTCGGCCTGA

Protein sequence : 
MGNYFESPFRGKLLSEQVSNPNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSIGSGAAFIMAGNQGHR
AEWASTFPFHFMHEEPAFAGAVNGYQPAGDTLIGHDVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAIVGGNPART
IRKRFSDGDIQNLLEMAWWDWPLADIEAAMPLLCTGDIPALYQHWKQRQASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 1e-70 74
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 1e-70 74
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 4e-70 72

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat YP_005979623.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 9e-90 99
cat YP_005979623.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 7e-71 74
cat YP_005979623.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 7e-71 74
cat YP_005979623.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 2e-70 72
cat YP_005979623.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 2e-60 65
cat YP_005979623.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 7e-36 43