Gene Information

Name : hxcT (NCGM2_1344)
Accession : YP_005979595.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : HxcT pseudopilin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1466929 - 1467378 bp
Length : 450 bp
Strand : +
Note : similar to GI:116048588; similar to PA14_55490 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGGATGTCGTGCAGTTCAGCTCCAGCCCGAAAGGACATCGGGGACAGCGGGGCTTCACCCTGATCGAGATCATGGTGGT
GGTGGTGATCCTCGGCATCCTCGCCGCGATGGTGGTGCCCAAGGTGCTCGACCGTCCCGACCAGGCCCGTGCCACCGCGG
CGCGCCAGGACATCTCCGGGCTGATGCAGGCGCTCAAGCTCTACCGCCTCGACCAGGGCCGCTATCCGAGCCAGGCGCAG
GGCTTGAAGGTGCTCGCGGAGCGCCCTGCCGATGCCTCGGCGAGCAACTGGCGCTCGTACCTGGAGCGCCTGCCCAACGA
CCCCTGGGGCAAGCCCTACCAGTACCTGAATCCCGGCGTGAACGGCGAGATCGACGTGTTCTCCCTCGGCGCCGACGGGC
AGCCGGGCGGCGAGGGCATCAACGCCGACATCGGCTCCTGGCAGCTCTGA

Protein sequence :
MDVVQFSSSPKGHRGQRGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDISGLMQALKLYRLDQGRYPSQAQ
GLKVLAERPADASASNWRSYLERLPNDPWGKPYQYLNPGVNGEIDVFSLGADGQPGGEGINADIGSWQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-34 53
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-34 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hxcT YP_005979595.1 HxcT pseudopilin VFG1871 Protein 2e-40 59
hxcT YP_005979595.1 HxcT pseudopilin VFG0180 Protein 1e-36 57
hxcT YP_005979595.1 HxcT pseudopilin VFG2050 Protein 8e-35 52