Gene Information

Name : pykA (NCGM2_1275)
Accession : YP_005979531.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1385635 - 1387086 bp
Length : 1452 bp
Strand : -
Note : similar to GI:116052363; similar to PA14_56240 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGTCCGTTCGCCGCACCAAAATCGTCGCCACCCTCGGCCCAGCCAGCAATTCCCCGGAAGTGCTGGAGCAACTGATCCT
GGCCGGGATCGACGTCGCCCGCCTCAACTTCTCCCACGGCACCCCCGATGAACACCGCGCCCGCGCCAGGCTGGTGCGCG
AACTGGCGGCCAAGCACGGCCGCTTCGTCGCCCTGCTCGGCGACCTGCAAGGACCGAAGATCCGCATCGCCAAGTTCGCC
AACAAGCGCATCGAATTGCAGGTCGGCGACAAGTTCCGCTTCTCCACCAGCCACGCCCGCGACGCCGGTACCCAGGAAGT
GGTCGGCATCGACTACCCGGACCTGGTGAAGGACTGCGGGGTCGGCGATGAACTGCTGCTGGACGACGGCCGGGTGGTGA
TGGTGGTCGAGGAAGTCGCCGCCGACGAACTGCGCTGCCGGGTGCTGATCGGCGGCCCGCTGTCCGACCACAAGGGCATC
AACCGCCGCGGCGGCGGTCTCACCGCGCCGGCGCTGACCGACAAGGACAAGGCCGACATCAAGCTGGCCGCGGACATGGA
CCTGGACTACGTGGCCGTTTCCTTCCCGCGCGATGCCAAGGACATGGAGTACGCCCGCCGCCTGCTCACCGAGGCCGGTG
GCAAGGCCTGGCTGGTGGCCAAGATCGAGCGCGCCGAGGCGGTCGCCGACGACGACGCCCTCGACGGCCTGATTCGTGCC
AGCGACGCGGTGATGGTGGCCCGTGGCGACCTCGGCGTGGAAATCGGCGATGCCGAGCTGGTCGGCATCCAGAAGAAGAT
CATCCTGCACGCTCGCCGCAACAATAAAGTGGTGATCACCGCGACCCAGATGATGGAGTCGATGATCCACAGCCCGATGC
CGACCCGCGCGGAAGTCTCCGACGTGGCCAACGCCGTGCTCGACTACACCGACGCGGTGATGCTCTCGGCGGAAAGCGCC
GCCGGCGAGTACCCGGTGGAAGCGGTGAAAGCCATGGCCCGCGTCTGCCAGGGCGCCGAGAAGCACCCGACCAGCCAGAA
ATCCAGCCACCGCCTCGGCCAGACTTTCGACCGCTGCGACGAGAGCATCGCCCTGGCGTCGATGTACACGGCCAACCACT
TCCCGGGGATCAAGGCGATCATCTGCCTGACCGAAAGCGGCTTCACCCCGCTGATCATGTCGCGCATCCGCTCGTCGGTA
CCGATCTACGCCTACTCCCCGCACCGCGAGACCCAGGCTCGCGTGGCGATGTTCCGCGGCGTGGAAACCATCCCCTTCGA
CCCGGCGGCGCTGCCGGCGGAGAAGGTCAGCCAGGCCGCGGTCGACGAGTTGCTCAAGCGCGGCGTGGTGACCAAGGGCG
ACTGGGTGATCCTGACCAAGGGCGACAGCTACACCGCCCAGGGCGGCACCAACACCATGAAGGTGCTGCACGTCGGCGAC
CTGCTGGTATAA

Protein sequence :
MSVRRTKIVATLGPASNSPEVLEQLILAGIDVARLNFSHGTPDEHRARARLVRELAAKHGRFVALLGDLQGPKIRIAKFA
NKRIELQVGDKFRFSTSHARDAGTQEVVGIDYPDLVKDCGVGDELLLDDGRVVMVVEEVAADELRCRVLIGGPLSDHKGI
NRRGGGLTAPALTDKDKADIKLAADMDLDYVAVSFPRDAKDMEYARRLLTEAGGKAWLVAKIERAEAVADDDALDGLIRA
SDAVMVARGDLGVEIGDAELVGIQKKIILHARRNNKVVITATQMMESMIHSPMPTRAEVSDVANAVLDYTDAVMLSAESA
AGEYPVEAVKAMARVCQGAEKHPTSQKSSHRLGQTFDRCDESIALASMYTANHFPGIKAIICLTESGFTPLIMSRIRSSV
PIYAYSPHRETQARVAMFRGVETIPFDPAALPAEKVSQAAVDELLKRGVVTKGDWVILTKGDSYTAQGGTNTMKVLHVGD
LLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 3e-64 45
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 5e-48 43
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 7e-49 43
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-49 43
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-49 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pykA YP_005979531.1 pyruvate kinase VFG0479 Protein 3e-49 43