Gene Information

Name : murD (NCGM2_1189)
Accession : YP_005979445.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Unknown
Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1295366 - 1296712 bp
Length : 1347 bp
Strand : +
Note : similar to GI:116052448; similar to PA14_57370 of P. aeruginosa UCBPP-PA14

DNA sequence :
ATGAGCCTGATCGCCTCCGACCACTTCCGCATCGTTGTCGGCCTCGGCAAGAGCGGCATGTCCCTGGTGCGCTACCTGGC
GCGCCGCGGCTTGCCTTTCGCCGTGGTCGATACCCGAGAGAACCCGCCGGAGCTGGCCACCCTGCGTGCCCAGTATCCGC
AGGTGGAAGTGCGTTGCGGCGAACTCGACGCCGAGTTCCTCTGCTCCGCCCGCGAACTCTATGTCAGCCCCGGCTTGTCG
CTGCGCACCCCTGCGCTGGTACAGGCCGCCGCGAAAGGCGTGCGCATCTCCGGTGACATCGATCTCTTCGCCCGCGAGGC
GAAGGCCCCGATCGTCGCCATCACCGGTTCCAACGCGAAGAGCACCGTGACCACCCTGGTGGGCGAAATGGCGGTGGCCG
CGGACAAGCGTGTCGCCGTCGGCGGCAACCTCGGCACCCCGGCGCTCGACCTGCTGGCCGACGACATCGAGCTGTACGTG
CTGGAGCTGTCGAGCTTCCAGCTGGAAACCTGCGATCGCCTCAACGCCGAGGTGGCGACCGTGCTGAACGTCAGCGAAGA
CCATATGGATCGCTACGACGGCATGGCTGACTACCACCTGGCCAAGCACCGGATCTTCCGCGGTGCCCGCCAGGTCGTGG
TGAATCGCGCCGATGCCCTGACCCGACCGCTGATCGCCGATACCGTGCCGTGCTGGTCGTTCGGCCTGAACAAGCCGGAC
TTCAAGGCTTTCGGCCTGATCGAGGAAGACGGCCAGAAGTGGCTGGCGTTCCAGTTCGACAAGCTGCTGCCGGTTGGCGA
ACTGAAGATCCGTGGCGCCCACAACTATTCCAACGCGCTCGCCGCGCTGGCGCTGGGCCATGCGGCCGGCCTGCCGTTCG
ACGCCATGCTCGGCGCGCTGAAGGCGTTTTCCGGCCTGGCTCATCGCTGCCAGTGGGTACGCGAGCGGCAGGGCGTGAGC
TACTACGACGATTCCAAGGCCACCAACGTCGGCGCCGCCCTGGCGGCGATCGAGGGGCTGGGTGCCGACATCGACGGCAA
GCTGGTGCTGCTCGCCGGCGGAGACGGCAAGGGCGCCGATTTCCATGACCTGCGCGAGCCGGTCGCGCGCTTCTGCCGGG
CGGTGGTACTGCTTGGCCGTGACGCCGGGCTGATTGCCCAGGCACTGGGCAACGCGGTACCGCTGGTGCGCGTCGCAACG
CTGGACGAAGCAGTCCGGCAGGCCGCCGAGCTGGCCCGCGAAGGCGATGCGGTGCTGTTGTCGCCGGCCTGCGCGAGCCT
GGACATGTTCAAGAACTTCGAAGAACGCGGACGCCTGTTCGCCAAAGCCGTAGAGGAGCTAGCGTGA

Protein sequence :
MSLIASDHFRIVVGLGKSGMSLVRYLARRGLPFAVVDTRENPPELATLRAQYPQVEVRCGELDAEFLCSARELYVSPGLS
LRTPALVQAAAKGVRISGDIDLFAREAKAPIVAITGSNAKSTVTTLVGEMAVAADKRVAVGGNLGTPALDLLADDIELYV
LELSSFQLETCDRLNAEVATVLNVSEDHMDRYDGMADYHLAKHRIFRGARQVVVNRADALTRPLIADTVPCWSFGLNKPD
FKAFGLIEEDGQKWLAFQFDKLLPVGELKIRGAHNYSNALAALALGHAAGLPFDAMLGALKAFSGLAHRCQWVRERQGVS
YYDDSKATNVGAALAAIEGLGADIDGKLVLLAGGDGKGADFHDLREPVARFCRAVVLLGRDAGLIAQALGNAVPLVRVAT
LDEAVRQAAELAREGDAVLLSPACASLDMFKNFEERGRLFAKAVEELA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00311 YP_008207776.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR25 Protein 1e-91 54
BJAB0868_00315 YP_008211641.1 UDP-N-acetylmuramoylalanine-D-glutamate ligase Not tested AbaR26 Protein 1e-91 54