Gene Information

Name : yrbH (NCGM2_1145)
Accession : YP_005979401.1
Strain : Pseudomonas aeruginosa NCGM2.S1
Genome accession: NC_017549
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1253759 - 1254739 bp
Length : 981 bp
Strand : -
Note : similar to GI:116052489; similar to PA14_57890 of P. aeruginosa UCBPP-PA14

DNA sequence :
TTGAACATGAGCCAGAACCTCGATTTCATCCATTCCGCCCAGCGCACCATCGGCCTCGAGCGCGACGCGGTAGACAGCCT
GCTGGCGCGGATTGGCGACGATTTCGTCAAGGCCTGCGAGCTGCTGCTGGCCGGCAAGGGCCGGGTCGTCGTCGTCGGCA
TGGGCAAGTCCGGTCACATCGGCAAGAAGATCGCCGCTACCCTGGCCAGCACCGGCACCCCCTCCTTCTTCGTGCATCCG
GCCGAGGCCAGCCACGGCGACATGGGCATGATCACCAAGGACGACGTGGTCCTCGCCCTGTCCAACTCCGGCTCGACTGC
CGAAATCGTCACCCTGTTGCCTCTGATCAAGCGCCTGGGCATCACCCTGATCAGCATGACCGGCAACCCCGAGTCGCCCC
TGGCCAAGGCTGCGGAAGTGAACCTGGACGCCAGTGTCGGCCAGGAAGCCTGTCCACTGAACCTGGCCCCGACCTCCTCC
ACCACCGTAACCCTGGTCCTCGGCGACGCCCTGGCGATCGCCCTGCTCGAAGCTCGCGGCTTTACCGCGGAAGACTTCGC
CTTCTCGCACCCGGGCGGTGCGCTGGGCCGCCGACTGCTGCTGAAGGTGGAAGACGTCATGCACGTCGGCGAAGGGCTGC
CGCAGGTGCTGCTCGGCACCTCGCTGACCGGCGCGCTGATGGAAATGACCCGCAAGGGCCTGGGCATGACCGTAGTGCTC
GACGAACACGGCAAGCTTGCCGGCATTTTCACCGATGGCGACCTGCGTCGCGCCCTGGATCGGGGCATCGACGTCCGCCA
GGTCACCATCGACCAGGTGATGACCGTCCACGGCAAGACCGTCCGCGCCGAGATTCTCGCCGCGGAAGCCCTGAAGATCA
TGGAAGACAACAAGATCGGCGCACTGGTGGTGGTCGACGCGGACGACCGTCCGGTCGGCGCCCTGAACATGCACGACCTG
TTGCGCGCAGGAGTGATGTAA

Protein sequence :
MNMSQNLDFIHSAQRTIGLERDAVDSLLARIGDDFVKACELLLAGKGRVVVVGMGKSGHIGKKIAATLASTGTPSFFVHP
AEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITLISMTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSS
TTVTLVLGDALAIALLEARGFTAEDFAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVL
DEHGKLAGIFTDGDLRRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALVVVDADDRPVGALNMHDL
LRAGVM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 2e-49 47
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 4e-49 46
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 5e-49 46