Gene Information

Name : PAM18_0748 (PAM18_0748)
Accession : YP_005973339.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : putative aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 821706 - 823007 bp
Length : 1302 bp
Strand : -
Note : -

DNA sequence :
GTGGCCAGCGCGCGGCGGGCGTTCGAGGACGGCCGCTGGCGCTCGCGCACGCCCGCCGAGCGCAAGGCGGCGCTGCTGCG
CCTAGCCGAGCTGCTGGAAGAGCACCTGCTGGAACTGGCGGTGATGGAGAGCCTCGACAGCGGCAAGCCGATCCGCGAAT
GCCAGCACACCGACCTGCCGGAAACCATCAATACCCTGCGCTGGCATGCCGAACTGATCGACAAGATCTACGACAGCACC
GCCCCGGTCGGTTCAGCGGCGCTGGCCATGGTGGTGCGCGAGCCGATCGGCGTGGTCGGCCTGGTGCTGCCGTGGAACTT
CCCGCTGCTGATGCTCGCCTGGAAGATCGGCCCGGCGCTGGCGGCAGGCTGCTCCGTAGTGGTCAAGCCGGCCCCCGAGA
CCAGCCTGACCGCCCTGCGCGTCGCCGAACTGGCCAGCCAGGCGGGGATCCCCGCCGGGGTGTTCAACGTGGTCCCCGGC
GGCGGCCGCGAGGCCGGCGAACCGCTGGGCCGCCACCCGGACGTGGCGATGGTCAGCTTCACCGGCTCCACCGCGACCGG
CCGCCTGTTCCTCAAGTACGCCGCCGAGTCCAACCTCAAGCGGGTGGTACTGGAGTGCGGCGGCAAGAACCCGGCGGTGG
TGATGAACGATGTCGAGGACCTCGACCTGGTGGCGCAACACGTGGTCAACGGCGCGTTCTGGAACATGGGCGAGAACTGC
TCGGCGTCCTCGCGGCTGATCGTCCACGCCGAGGTCCGCGAGGCGCTGCTCGAACGCATCGGCGCGCAGCTCCGCGAGTG
GCGCATGGGCGACCCGCTGGATCCGCGTAATCGCCTCGGCGCGCTGGTCAGCCCGGCGCACTTCGAGAAGGTCCGCGCGT
ACCTCGACCAGGCCAGGACGGAGCGGTTGGCGGTGCGCTTCGGCGGCGCCACCGAGGCTGGCATCTTCGTCGAGCCGACC
GTGGTCGATGGCGTCTCGCCGCACAGCCGGCTGTTCCGCGAGGAAATCTTCGGCCCGCTGCTCTCGGTCACCTCTTTCGA
CGACATCGACGAAGCCATCGCCCTGGCCAACGACACCGTCTACGGCCTCGCCGCCTCGGCCTACACCGGCAGCCTGCGCC
ACGCACTGCGCCTGTCGCGAGAGATCCGCGCGGGGATCGTCACCGTCAACTGCTTCGGCGAGGGCGACGCCTCGACGCCC
TTCGGCGGCTACAAGGAGTCAGGCTTCGGCGGTCGCGACAAGTCGGTCTGGGCACACGACCAGTACACAGAGTTGAAGAC
CATCTGGATCGACGCTTCCTGA

Protein sequence :
MASARRAFEDGRWRSRTPAERKAALLRLAELLEEHLLELAVMESLDSGKPIRECQHTDLPETINTLRWHAELIDKIYDST
APVGSAALAMVVREPIGVVGLVLPWNFPLLMLAWKIGPALAAGCSVVVKPAPETSLTALRVAELASQAGIPAGVFNVVPG
GGREAGEPLGRHPDVAMVSFTGSTATGRLFLKYAAESNLKRVVLECGGKNPAVVMNDVEDLDLVAQHVVNGAFWNMGENC
SASSRLIVHAEVREALLERIGAQLREWRMGDPLDPRNRLGALVSPAHFEKVRAYLDQARTERLAVRFGGATEAGIFVEPT
VVDGVSPHSRLFREEIFGPLLSVTSFDDIDEAIALANDTVYGLAASAYTGSLRHALRLSREIRAGIVTVNCFGEGDASTP
FGGYKESGFGGRDKSVWAHDQYTELKTIWIDAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 4e-88 49
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-59 41
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-59 41
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-59 41
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-59 41
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-59 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_0748 YP_005973339.1 putative aldehyde dehydrogenase VFG0082 Protein 8e-60 41