Gene Information

Name : PAM18_4687 (PAM18_4687)
Accession : YP_005977269.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : putative ATP-binding component of ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5186864 - 5187550 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
TTGATCTCCCTGCGGGGGATCGGCAAGGGCTACCTCCTGGGGGGGCAGCCGCTGCAGATACTGAAAGACGTCTGCCTGGA
CATCTTTCCCGGAGAAAGCTGCGCGATCGTCGGCGCGTCGGGCTCGGGCAAGAGCACCCTGCTGAATATCCTCGGCCTGC
TCGACCGCCCGGACAGCGGTGCCTACCGCTTCGCCGAGCACGACATCTTCAGCGTCGACGGGGACCGACTGGGGGCGATC
CGCAACCGCCTGATCGGCTTCGTCTTCCAGAGCTTCAACCTGTTGCCGCGGCTGAACGCGCTGGACAACGTCGCGCTGCC
CCTGAGCTATCGAGGGATGCCGCGCCGCGAGGCACTGGAGCGGGCCGAGGCGATGCTCGCCCGGGTCGGCCTGGCCGAGC
GCGCCGGCCATCGTCCGGCGGACCTCTCCGGCGGCCAGCGGCAGCGCGTCGCCATCGCTCGCGCGCTGGTCGGTGAGCCG
GCGCTGATCCTCGCCGACGAACCAACCGGCAACCTCGACGCGAGCACCGCGAAAGAAGTGCTGGAGCTGCTCCTCACCCT
CAACCGCGAGCGCCAGGTGACCCTGGTGGTGGTCACCCATGATCCCGGCCTGGCGGCCCGTCTCGGGCGCCAACTGACAG
TGCGGCATGGCGAGGTGCACGAGGACCTGGCGGAGGCCTGCCGGTGA

Protein sequence : 
MISLRGIGKGYLLGGQPLQILKDVCLDIFPGESCAIVGASGSGKSTLLNILGLLDRPDSGAYRFAEHDIFSVDGDRLGAI
RNRLIGFVFQSFNLLPRLNALDNVALPLSYRGMPRREALERAEAMLARVGLAERAGHRPADLSGGQRQRVAIARALVGEP
ALILADEPTGNLDASTAKEVLELLLTLNRERQVTLVVVTHDPGLAARLGRQLTVRHGEVHEDLAEACR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-25 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-25 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_4687 YP_005977269.1 putative ATP-binding component of ABC transporter NC_008702.1.4606598. Protein 3e-43 52
PAM18_4687 YP_005977269.1 putative ATP-binding component of ABC transporter NC_012469.1.7686878. Protein 1e-47 49
PAM18_4687 YP_005977269.1 putative ATP-binding component of ABC transporter CP001581.1.gene798.p Protein 4e-34 45
PAM18_4687 YP_005977269.1 putative ATP-binding component of ABC transporter NC_012469.1.7686946. Protein 8e-25 43
PAM18_4687 YP_005977269.1 putative ATP-binding component of ABC transporter CP001581.1.gene598.p Protein 7e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_4687 YP_005977269.1 putative ATP-binding component of ABC transporter VFG2059 Protein 1e-14 42