Gene Information

Name : PAM18_4357 (PAM18_4357)
Accession : YP_005976940.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : HxcT pseudopilin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4815646 - 4816095 bp
Length : 450 bp
Strand : -
Note : -

DNA sequence : 
ATGGATGTCGTGCAGTTCAGCTCCAGCCCGAAAGGACATCGGGGACAGCGGGGCTTCACCCTGATCGAGATCATGGTGGT
GGTGGTGATCCTCGGCATCCTCGCCGCGATGGTGGTGCCCAAGGTGCTCGACCGTCCCGACCAGGCCCGCGCCACCGCGG
CGCGCCAGGACATCTCCGGGCTGATGCAGGCGCTCAAGCTCTACCGCCTCGACCAGGGCCGCTATCCGAGCCAGGCGCAG
GGCTTGAAGGTGCTCGCGGAGCGCCCTGCCGATGCCTCGGCGAGCAACTGGCGCTCGTACCTGGAGCGCCTGCCCAACGA
TCCCTGGGGCAAGCCCTACCAGTACCTGAATCCCGGCGTGAACGGCGAGATCGACGTGTTCTCCCTCGGCGCCGACGGGC
AGCCGGGCGGCGAGGGCATCAACGCCGACATCGGCTCCTGGCAGCTCTGA

Protein sequence : 
MDVVQFSSSPKGHRGQRGFTLIEIMVVVVILGILAAMVVPKVLDRPDQARATAARQDISGLMQALKLYRLDQGRYPSQAQ
GLKVLAERPADASASNWRSYLERLPNDPWGKPYQYLNPGVNGEIDVFSLGADGQPGGEGINADIGSWQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-34 53
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-34 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_4357 YP_005976940.1 HxcT pseudopilin VFG1871 Protein 2e-40 59
PAM18_4357 YP_005976940.1 HxcT pseudopilin VFG0180 Protein 1e-36 57
PAM18_4357 YP_005976940.1 HxcT pseudopilin VFG2050 Protein 8e-35 52