Gene Information

Name : cat (PAM18_4330)
Accession : YP_005976913.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Resistance
Product : chloramphenicol acetyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4774055 - 4774693 bp
Length : 639 bp
Strand : +
Note : -

DNA sequence : 
ATGGGCAACTATTTCGAGAGCCCCTTCAGGGGCAAGCTGCTCTCGGAACAGGTCAGCAACCCAAACATTCGGGTGGGGCG
CTACAGCTACTACTCCGGCTACTATCACGGGCATTCCTTCGACGACTGCGCCCGCTACCTGATGCCGGACCGCGACGACG
TGGACAAGCTGGTCATCGGCAGTTTCTGTTCGATCGGCAGTGGCGCCGCCTTCATCATGGCCGGCAACCAGGGACACCGC
GCCGAATGGGCATCGACCTTCCCCTTCCACTTCATGCACGAAGAGCCGGCCTTCGCCGACGCCGTGAACGGCTACCAGCC
AGCCGGCGACACGCTGATCGGCCATGACGTCTGGATCGGTACCGAGGCGATGTTCATGCCCGGCGTACGGGTCGGCCACG
GAGCCATCATCGGCAGCCGCGCGCTGGTGACCGGCGATGTCGAGCCCTATGCCATCGTCGGCGGTAACCCGGCCCGGACC
ATTCGTAAGCGCTTTTCCGATGGCGATATCCAGAACCTGCTGGAAATCGCCTGGTGGGACTGGCCACTGGCCGATATCGA
GGCAGCCATGCCGCTGCTGTGCGCCGGGGACATCCCCGCCTTGTACCGGCACTGGAAACAGCGCCAGGCCACGGCCTGA

Protein sequence : 
MGNYFESPFRGKLLSEQVSNPNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSIGSGAAFIMAGNQGHR
AEWASTFPFHFMHEEPAFADAVNGYQPAGDTLIGHDVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAIVGGNPART
IRKRFSDGDIQNLLEIAWWDWPLADIEAAMPLLCAGDIPALYRHWKQRQATA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 2e-70 73
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 2e-70 73
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 5e-70 72

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cat YP_005976913.1 chloramphenicol acetyltransferase NC_002516.2.878374.p Protein 2e-89 99
cat YP_005976913.1 chloramphenicol acetyltransferase AY740681.1.gene5.p01 Protein 1e-70 73
cat YP_005976913.1 chloramphenicol acetyltransferase AF322577.2.gene4.p01 Protein 1e-70 73
cat YP_005976913.1 chloramphenicol acetyltransferase AY123251.gene2.p01 Protein 2e-70 72
cat YP_005976913.1 chloramphenicol acetyltransferase JF268688.1.gene6.p01 Protein 2e-60 64
cat YP_005976913.1 chloramphenicol acetyltransferase CP001581.1.gene990.p Protein 2e-36 44