Gene Information

Name : PAM18_0400 (PAM18_0400)
Accession : YP_005972991.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Resistance
Product : putative cystathionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 435531 - 436715 bp
Length : 1185 bp
Strand : +
Note : -

DNA sequence :
ATGAGCCAGCACGACCAGCATCCCGACGCCCCGGCCCAGGCCTTTGCGACCCGGGTCATCCACGCCGGGCAGGCCCCCGA
TCCCTCGACCGGCGCGATCATGCCGCCGATCTACGCCAACTCCACCTATATCCAGGAAAGCCCCGGGGTACACAAGGGGC
TCGACTACGGCCGCTCGCACAACCCGACCCGCTGGGCCCTGGAGCGCTGCGTGGCCGACCTCGAGGGCGGCGCCCAGGCC
TTCGCCTTCGCCTCCGGCCTGGCGGCGATCTCCTCGGTGCTGGAGCTGCTCGACGCCGGTTCCCACATCGTTTCCGGCAA
TGACCTCTACGGCGGTACCTTCCGCCTGTTCGAGCGGGTCCGCCGGCGCAGCGCCGGGCATCGCTTCAGCTTCGTCGACC
CGACCGACCTGCAGGCCTTCGAGGCCGCGCTGACCCCGGAAACCCGCATGGTCTGGGTGGAAACCCCGAGCAACCCGCTG
CTGCGCCTCACCGACCTGCGCGCCATCGCCCAGCTCTGCCGCGCCCGCGGCATCATCAGCGTGGCCGACAACACCTTCGC
CAGCCCCTACATCCAGCGCCCCCTGGAACTGGGCTTCGACGTGGTGGTGCACTCCACCACCAAGTACCTGAACGGCCATT
CCGACGTGATCGGCGGCATCGCCATCGTCGGCGACAACCCGGACCTGCGCGAGCGCCTGGGCTTCCTGCAGAACTCGGTG
GGCGCCATCTCCGGGCCGTTCGACGCCTTCCTCACCCTGCGCGGGGTGAAGACCCTGGCGCTGCGCATGGAGCGCCATTG
CAGCAACGCCCTGGCCCTGGCCCAGTGGCTGGAGCGCCAGCCGCAGGTGGCGCGGGTCTACTACCCCGGCCTGGTTTCGC
ACCCGCAGCATGAGCTGGCGAAACGGCAGATGCGTGGCTTCGGCGGGATGATCTCCCTCGACCTGCGTTGCGACCTGGCC
GGCGCCCGGCGCTTCCTGGAGAACGTGCGGATCTTCTCCCTGGCGGAGAGCCTGGGCGGGGTGGAAAGCCTGATCGAGCA
TCCGGCGATCATGACCCACGCCAGCATCCCGGCGGAAACCCGCGCCGACCTGGGCATTGGTGACTCGCTGATCCGCCTGT
CGGTGGGCGTCGAGGCGCTGGAGGACCTGCAGGCCGACCTGGCGCAGGCGCTGGCGAAGATCTGA

Protein sequence :
MSQHDQHPDAPAQAFATRVIHAGQAPDPSTGAIMPPIYANSTYIQESPGVHKGLDYGRSHNPTRWALERCVADLEGGAQA
FAFASGLAAISSVLELLDAGSHIVSGNDLYGGTFRLFERVRRRSAGHRFSFVDPTDLQAFEAALTPETRMVWVETPSNPL
LRLTDLRAIAQLCRARGIISVADNTFASPYIQRPLELGFDVVVHSTTKYLNGHSDVIGGIAIVGDNPDLRERLGFLQNSV
GAISGPFDAFLTLRGVKTLALRMERHCSNALALAQWLERQPQVARVYYPGLVSHPQHELAKRQMRGFGGMISLDLRCDLA
GARRFLENVRIFSLAESLGGVESLIEHPAIMTHASIPAETRADLGIGDSLIRLSVGVEALEDLQADLAQALAKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-73 47
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-74 47
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 1e-50 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_0400 YP_005972991.1 putative cystathionine gamma-lyase BAC0207 Protein 2e-67 46