Gene Information

Name : fliP (PAM18_3685)
Accession : YP_005976268.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4091235 - 4092002 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
ATGACTCCGCGCATCTCCCTGGCCGGCGCGCTCGCCGCGCTCTGCCTCCTGCTGCTGGCGCCGTGGCCGGCGCTGGCCGC
CGACCCGACATCGATCTCGGCGATCACCGTGACCACCAACGGCCAGGGCCAGCAGGAGTATTCGGTCAGCCTGCAGATCC
TGCTGATCATGACCGCGCTGAGCTTCATCCCGGCGTTCGTCATGCTGATGACCAGCTTCACCCGGATCATCATCGTCTTC
TCCATCCTGCGCCAGGCGCTGGGCCTGCAATCGACGCCGTCGAACCAGGTGCTGGTGGGGCTGGCGCTGTTCCTGACCAT
GTTCGTCATGGCCCCGGTATTCGACAAGATCAACAGCCAGGCCCTGCAGCCCTACCTGAACGAGCAGATTCCCGCCCAGG
AAGCCCTGCAAAAGGCCGAGGTACCGCTGAAGGCGTTCATGCTGGCGCAGACTCGCACCTCCGACCTGGAGCTGTTCGTG
CGCCTGTCCAAGCGCACCGACATCGGCAGCCCGGAGGCGACGCCGCTGACCATCCTGGTCCCGGCCTTCGTCACGTCCGA
GCTGAAGACCGCGTTCCAGATCGGCTTCATGATCTTCATCCCGTTCCTGATCATCGACCTGGTGGTGTCCAGCGTGCTGA
TGGCGATGGGCATGATGATGCTGTCGCCGCTGATCATTTCCCTGCCGTTCAAGATCATGCTGTTCGTCCTGGTGGATGGC
TGGGCGCTGATCATCGGGACGCTGGCGGGCAGTTTCGGCACCGTCTAG

Protein sequence :
MTPRISLAGALAALCLLLLAPWPALAADPTSISAITVTTNGQGQQEYSVSLQILLIMTALSFIPAFVMLMTSFTRIIIVF
SILRQALGLQSTPSNQVLVGLALFLTMFVMAPVFDKINSQALQPYLNEQIPAQEALQKAEVPLKAFMLAQTRTSDLELFV
RLSKRTDIGSPEATPLTILVPAFVTSELKTAFQIGFMIFIPFLIIDLVVSSVLMAMGMMMLSPLIISLPFKIMLFVLVDG
WALIIGTLAGSFGTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 2e-33 44
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 3e-29 42
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 3e-29 42
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 3e-29 42
yscR NP_456109.1 putative type III secretion protein Virulence SPI-2 Protein 2e-31 41
yscR NP_805090.1 type III secretion system protein Virulence SPI-2 Protein 2e-31 41
ssaR YP_216427.1 type III secretion system protein Virulence SPI-2 Protein 5e-32 41
ssaR CAA68199.1 secretion system apparatus, SsaR Virulence SPI-2 Protein 4e-32 41
ssaR NP_460384.1 type III secretion system protein Virulence SPI-2 Protein 5e-32 41
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 9e-30 41
escR CAC81847.1 EscR protein Virulence LEE II Protein 2e-31 41
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 3e-31 41
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 3e-31 41
escR CAI43889.1 EscR protein Virulence LEE Protein 2e-31 41
escR AAC31528.1 L0049 Virulence LEE Protein 2e-31 41
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 2e-31 41
escR AAC38369.1 EscR Virulence LEE Protein 2e-30 41
ECs4583 NP_312610.1 type III secretion system protein Virulence LEE Protein 7e-31 41
escR AAK26700.1 EscR Virulence LEE Protein 2e-31 41
escR YP_003223490.1 T3SS structure protein EscR Virulence LEE Protein 3e-31 41
escR AAL57527.1 EscR Virulence LEE Protein 2e-31 41
escR YP_003232138.1 type III secretion system protein Virulence LEE Protein 3e-31 41
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 5e-30 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 5e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_005976268.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-102 100
fliP YP_005976268.1 flagellar biosynthesis protein FliP VFG2016 Protein 6e-67 62
fliP YP_005976268.1 flagellar biosynthesis protein FliP VFG2494 Protein 4e-64 60
fliP YP_005976268.1 flagellar biosynthesis protein FliP VFG2338 Protein 3e-61 58
fliP YP_005976268.1 flagellar biosynthesis protein FliP VFG0394 Protein 4e-33 43
fliP YP_005976268.1 flagellar biosynthesis protein FliP VFG0044 Protein 7e-34 42
fliP YP_005976268.1 flagellar biosynthesis protein FliP VFG0519 Protein 2e-32 41
fliP YP_005976268.1 flagellar biosynthesis protein FliP VFG0188 Protein 3e-33 41
fliP YP_005976268.1 flagellar biosynthesis protein FliP VFG0715 Protein 9e-31 41
fliP YP_005976268.1 flagellar biosynthesis protein FliP VFG0827 Protein 1e-31 41