Gene Information

Name : pscT (PAM18_3355)
Accession : YP_005975940.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : translocation protein in type III secretion
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3737582 - 3738370 bp
Length : 789 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGTCCAGGACCTGCAGCAACTGCTGCTGACCTACAGCCTGCTGCTGCCGCGGATCATCAGTTGCTTCGTGGTCCT
ACCGGTGCTGGCCAAGCAAACCCTGGGCGGCGGCCTGGTGCGCAACGGCGTGGCCTGCTCGCTGGCGCTGTTCGCCTACC
CGATCGTCGCTGGCAGCCTGCCGCCGGCCCTCGACGCGCTGGACATCGCCCTGCTGATCGGCAAGGAAGTGCTGCTCGGC
CTGCTCATCGGCTTCGTCGCCACCATTCCCTTCTGGGCCATGGAAGCGACCGGCTTCATCATCGACAACCAGCGTGGCGC
GGCACTCGCCTCGACCTTCAACCCCAGCCTGGGCAGCCAGACCAGCCCCACCGGGCTGTTGCTGACGCAGACGCTGATCA
CCCTGTTCTTCTCCGGCGGCGCCTTCCTCGCGCTGGTCGGCTCGCTGTTCAGGAGCTATGCCAGTTGGCCGGTGAGCAGT
TTCTTCCCGCAGCTCGGCAGCCAATGGGTGGCATTCTTCTACGCGCAGTTCTCGCAGATGCTGATGCTCTGCGCGCTGTT
CGCCGCGCCGCTGCTGATCGCCATGTTCCTCGCCGAGTTCGGCCTGGCGCTGGTCAGCCGCTTCGCCCCGTCGCTGAACG
TGTTCATCCTCGCCATGCCGATCAAGAGCCTGGTGGCCAGCCTGCTGCTGGTGCTCTACCTGGGCATCCTCATGGAGCAC
GCCTACGATGCCCTGCTGCTCGCCGTCGACCCGCTGCGCCTGCTGCGTCCCGTGCTGGAGACGCCATGA

Protein sequence : 
MSVQDLQQLLLTYSLLLPRIISCFVVLPVLAKQTLGGGLVRNGVACSLALFAYPIVAGSLPPALDALDIALLIGKEVLLG
LLIGFVATIPFWAMEATGFIIDNQRGAALASTFNPSLGSQTSPTGLLLTQTLITLFFSGGAFLALVGSLFRSYASWPVSS
FFPQLGSQWVAFFYAQFSQMLMLCALFAAPLLIAMFLAEFGLALVSRFAPSLNVFILAMPIKSLVASLLLVLYLGILMEH
AYDALLLAVDPLRLLRPVLETP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscT AAO18038.1 LscT Virulence TTSS locus Protein 2e-59 78

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pscT YP_005975940.1 translocation protein in type III secretion VFG0186 Protein 7e-69 99
pscT YP_005975940.1 translocation protein in type III secretion VFG0396 Protein 1e-54 72