Gene Information

Name : PAM18_3354 (PAM18_3354)
Accession : YP_005975939.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : putative translocation protein in type III secretion
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3737319 - 3737585 bp
Length : 267 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCAGCGCCGACATCCTCCACTTCACCAACCAGACCCTGTGGCTGGTGCTGGTCCTGTCGCTGCCGCCGGTACTGGT
CGCGGCCCTGATCGGCACCCTGGTATCGCTGGTCCAGGCGCTCACCCAGATCCAGGAGCAGACCCTCGGCTTCGTCGCCA
AGCTGGTGGCCGTGGTGGTGGTACTGTTCGCCACCAGCGGCTGGCTGGGCGGCGAGCTGTACCGTTTCGCCGAAATGACC
CTGCTGAAGGTGCCGCTGGTGCGATGA

Protein sequence : 
MSSADILHFTNQTLWLVLVLSLPPVLVAALIGTLVSLVQALTQIQEQTLGFVAKLVAVVVVLFATSGWLGGELYRFAEMT
LLKVPLVR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscS AAO18039.1 LscS Virulence TTSS locus Protein 8e-14 78
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 0.057 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_3354 YP_005975939.1 putative translocation protein in type III secretion VFG0187 Protein 5e-17 100
PAM18_3354 YP_005975939.1 putative translocation protein in type III secretion VFG0395 Protein 3e-11 75