Gene Information

Name : popN (PAM18_3348)
Accession : YP_005975933.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : Type III secretion outer membrane protein PopN precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3731809 - 3732675 bp
Length : 867 bp
Strand : -
Note : -

DNA sequence : 
ATGGACATCCTCCAGAGTTCCTCCGCCGCGCCCCTCGCGCCGCGGGAAGCGGCCAACGCCCCCGCGCAGCAGGCCGGCGG
CAGCTTCCAGGGCGAGCGCGTCCACTACGTCTCCGTTTCGCAGTCGCTGGCCGATGCCGCGGAAGAGCTGACCTTCGCCT
TTTCCGAGCGCGCCGAGAAATCCCTGGCCAAGCGCCGCCTGAGCGACGCCCATGCGCGCCTGAGCGAAGTCCAGGCCATG
CTGCAGGAGTACTGGAAGCGCATTCCGGACCTGGAAAGCCAGCAGAAGCTCGAGGCGCTGATCGCCCACCTGGGCAGCGG
TCAACTGAGCAGCCTGGCGCAGCTTAGCGCTTACCTGGAGGGCTTCTCCGGCGAGATCAGCCAGCGCTTCCTGGCGCTGT
CGCGGGCGCGCGACGTCCTGGCCGGGCGGCCGGAGGCGCGGGCGATGCTGGCGCTGGTCGACCAGGCGTTGCTGCGGATG
GCCGACGAGCAGGGCCTGGAGATCGAACTCGGCCTGCGCATCGAGCCGCTGGCCGCCGAGGCCTCCGCCGCCGGTGTCGG
CGATATCCAGGCGCTGCGCGATACCTACCGTGACGCGGTACTCGACTACCGGGGCCTGTCGGCGGCCTGGCAGGACATCC
AGGCGCGCTTCGCCGCGACGCCGCTGGAGCGGGTCGTGGCCTTCCTGCAGAAAGCCCTGAGCGCCGACCTGGACAGTCAG
TCGAGCCGGCTCGATCCGGTGAAGCTGGAGCGGGTCATGAGCGACATGCACAAGCTGCGCGTGCTCGGCGGCCTGGCGGA
GCAGGTGGGGGCGCTCTGGCAGGTGCTGGTGACGGGGGAGCGGGGCCATGGCATACGGGCCTTCTGA

Protein sequence : 
MDILQSSSAAPLAPREAANAPAQQAGGSFQGERVHYVSVSQSLADAAEELTFAFSERAEKSLAKRRLSDAHARLSEVQAM
LQEYWKRIPDLESQQKLEALIAHLGSGQLSSLAQLSAYLEGFSGEISQRFLALSRARDVLAGRPEARAMLALVDQALLRM
ADEQGLEIELGLRIEPLAAEASAAGVGDIQALRDTYRDAVLDYRGLSAAWQDIQARFAATPLERVVAFLQKALSADLDSQ
SSRLDPVKLERVMSDMHKLRVLGGLAEQVGALWQVLVTGERGHGIRAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lopN AAO18045.1 LopN Virulence TTSS locus Protein 2e-74 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
popN YP_005975933.1 Type III secretion outer membrane protein PopN precursor VFG0193 Protein 4e-111 99
popN YP_005975933.1 Type III secretion outer membrane protein PopN precursor VFG0389 Protein 9e-50 49