Gene Information

Name : PAM18_3346 (PAM18_3346)
Accession : YP_005975931.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : putative type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3731192 - 3731563 bp
Length : 372 bp
Strand : -
Note : -

DNA sequence : 
ATGGACTGGGTTGAGCTGGCCGTCGCGCAGTTCTGCCAGGACCTGCGGGTGAGCGTACCGGCGCCGCTGGCGCGCGTGGT
GCAACTGGATTTCGAGGACAGCGGCACCTTGCAGCTGGAACGCCATGGCGAACAGTTGTCGCTCTGGCTGGCCTGTGACC
TGGCCTGGCACCAGGCCTATCGCGGCACCCTGCGGGCGTTGCGCCTGTGCCATGCGCGCGCGGCCGGGAGCCTGCCGCTG
CGTTGCGCCTGGAGCGGCGAATCGCGCCTGCTGCTGTGCATCACCCTGGAAGCCCGGCAGGTCGGCATCCCGACGCTGCA
CCAGGCCTTGCAGGCGCTGCGCTCGGCGCGCAGCGAAGTGCTCGCCGCATGA

Protein sequence : 
MDWVELAVAQFCQDLRVSVPAPLARVVQLDFEDSGTLQLERHGEQLSLWLACDLAWHQAYRGTLRALRLCHARAAGSLPL
RCAWSGESRLLLCITLEARQVGIPTLHQALQALRSARSEVLAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lssN AAO18047.1 LssN Virulence TTSS locus Protein 9e-23 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_3346 YP_005975931.1 putative type III secretion protein VFG0195 Protein 4e-44 99
PAM18_3346 YP_005975931.1 putative type III secretion protein VFG0387 Protein 6e-23 48