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Name : pscC (PAM18_3330) Accession : YP_005975915.1 Strain : Pseudomonas aeruginosa M18 Genome accession: NC_017548 Putative virulence/resistance : Virulence Product : Type III secretion outer membrane protein PscC precursor Function : - COG functional category : - COG ID : - EC number : - Position : 3718604 - 3720406 bp Length : 1803 bp Strand : - Note : - DNA sequence : ATGCGCCGCCTGCTGATCGGCGGACTGCTGGCGCTGCTGCCTGGCGCGGTCTTGCGCGCGCAGCCGCTGGACTGGCCCAG CCTGCCTTACGACTATGTGGCGCAGGGCGAAAGCCTGCGCGACGTGCTGGCCAACTTCGGCGCCAACTACGATGCCTCGG TGATCGTCAGCGACAAGGTCAACGACCAGGTCAGCGGTCGCTTCGACCTGGAAAGCCCGCAGGCCTTCCTGCAGTTGATG GCCTCCCTCTACAACCTCGGCTGGTACTACGACGGCACCGTGCTGTACGTATTCAAGACCACCGAGATGCAATCGCGGCT GGTGAGGCTGGAGCAGGTCGGCGAGGCCGAGCTGAAGCGCGCGCTGACCGCCGCCGGTATCTGGGAGGCGCGCTTCGGCT GGCGTGCCGACCCTTCCGGGCGACTGGTGCACGTGTCCGGTCCGGGGCGCTATCTCGAACTGGTCGAGCAGACCGCCCAG GTGCTGGAGCAGCAATACACCCTGCGCAGCGAAAAGACCGGCGACCTCAGCGTGGAGATCTTCCCGCTGCGCTATGCGGT CGCCGAGGACCGCAAGATCGAGTACCGCGACGACGAGATCGAGGCGCCGGGCATCGCCAGTATCCTCTCGCGGGTGCTCA GCGATGCCAACGTGGTTGCGGTGGGCGACGAGCCGGGCAAGCTGCGCCCGGGACCGCAATCGAGCCATGCGGTGGTCCAG GCGGAACCGTCGCTGAACGCGGTGGTGGTGCGCGACCACAAGGACCGGTTGCCCATGTATCGCCGCCTGATCGAAGCCCT CGACCGGCCCTCGGCGCGGATCGAGGTCGGCTTGTCGATCATCGACATCAATGCCGAGAACCTCGCCCAGCTGGGCGTCG ACTGGAGCGCCGGGATTCGCCTGGGCAACAACAAGTCGATCCAGATCCGCACCACCGGCCAGGATAGCGAGGAGGGCGGC GGCGCCGGTAGCGGGGCGGTCGGCAGCCTGGTGGACAGTCGCGGGCTGGATTTCCTGCTGGCCAAGGTCACCCTGTTGCA GAGCCAGGGACAGGCGCAGATCGGATCCCGGCCGACCCTGCTGACCCAGGAGAATACCCAGGCGGTGCTCGACCAGAGCG AAACCTACTATGTGCGGGTCACGGGCGAGCGGGTGGCCGAGCTGAAGGCGATCACCTACGGCACCATGCTGAAAATGACG CCGCGAGTGGTGACTCTCGGCGATACGCCGGAGATCAGCCTCAGCCTGCACATCGAGGACGGCAGCCAGAAGCCCAATAG CGCCGGCCTGGACAAGATCCCCACGATCAACCGCACGGTGATCGATACCATCGCCCGCGTGGGCCATGGCCAGAGCCTGC TGATCGGCGGCATCTACCGCGACGAACTGAGCCAGAGCCAGCGCAAGGTACCCTGGCTCGGCGACATTCCCTATCTCGGC GCGCTGTTCCGCACTACCGCGGACACCGTGCGCCGCTCGGTGCGGCTGTTCCTCATCGAGCCGCGGCTGATCGACGATGG CGTCGGCCATTACCTGGCGCTGAACAACCGTCGCGACCTGCGCGGCGGCCTGCTTGAAATCGACGAGTTGTCGAACCAGA GCCTGTCGTTGCGCAAGCTGCTCGGTAGCGCCCGCTGCCAGGCGCTGGCGCCGGCCAGGGCCGAACAGGAGCGCTTGCGC CAGGCCGGCCAGGGTTCGTTCCTCACGCCCTGCCGGATGGGTGCGCAGGAGGGCTGGCGGGTGACCGACGGCGCCTGTCC CAAGGACGGCGCCTGGTGCGTCGGCGCGGAGCGCGGGAATTAG Protein sequence : MRRLLIGGLLALLPGAVLRAQPLDWPSLPYDYVAQGESLRDVLANFGANYDASVIVSDKVNDQVSGRFDLESPQAFLQLM ASLYNLGWYYDGTVLYVFKTTEMQSRLVRLEQVGEAELKRALTAAGIWEARFGWRADPSGRLVHVSGPGRYLELVEQTAQ VLEQQYTLRSEKTGDLSVEIFPLRYAVAEDRKIEYRDDEIEAPGIASILSRVLSDANVVAVGDEPGKLRPGPQSSHAVVQ AEPSLNAVVVRDHKDRLPMYRRLIEALDRPSARIEVGLSIIDINAENLAQLGVDWSAGIRLGNNKSIQIRTTGQDSEEGG GAGSGAVGSLVDSRGLDFLLAKVTLLQSQGQAQIGSRPTLLTQENTQAVLDQSETYYVRVTGERVAELKAITYGTMLKMT PRVVTLGDTPEISLSLHIEDGSQKPNSAGLDKIPTINRTVIDTIARVGHGQSLLIGGIYRDELSQSQRKVPWLGDIPYLG ALFRTTADTVRRSVRLFLIEPRLIDDGVGHYLALNNRRDLRGGLLEIDELSNQSLSLRKLLGSARCQALAPARAEQERLR QAGQGSFLTPCRMGAQEGWRVTDGACPKDGAWCVGAERGN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscC | AAO18033.1 | LscC | Virulence | TTSS locus | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pscC | YP_005975915.1 | Type III secretion outer membrane protein PscC precursor | VFG0211 | Protein | 0.0 | 99 |
| pscC | YP_005975915.1 | Type III secretion outer membrane protein PscC precursor | VFG0402 | Protein | 5e-177 | 63 |
