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Name : pscD (PAM18_3329) Accession : YP_005975914.1 Strain : Pseudomonas aeruginosa M18 Genome accession: NC_017548 Putative virulence/resistance : Virulence Product : type III export protein PscD Function : - COG functional category : - COG ID : - EC number : - Position : 3717304 - 3718602 bp Length : 1299 bp Strand : - Note : - DNA sequence : ATGGCCTGGAAGATCCGCTTCTACAGCGGGCTGAACCAGGGCGCCGAAGTCTCGCTCGGAGAGGGCCGGGTGGCGCTTGG CAGCGATCCGTTGCAGGCCGACCTGGTGTTGCTCGACGAGGGCATCGCGGCAGTCCACCTGGTGCTCGAGGTCGATGCCC AGGGCGTGCGCCTGCTGGAATGGGCGGAGGGCTGCGAGCCTCGCCAGGACGGCCAGGCGCAAGTCGCCGGAGCGATCCTG CAGGCGCTTGCCGGGCAGACCTGCGGCCCGCTGCGCTGGGCATTCTGCGACCCGCAGCGGAGTTTTCCCGAGCGTTTCCC CGAAGCCGAGGTGCAGACCGCGCCAGTGCGCCGCAAGTCGTCCGCCCGTGCCGGCGGGGCCTGGCTGCTCGGCGTCAGCC TGGCGCTGGCGCTGTGTCTGCTGGGCATGCTCGTCGAACCCTGGTCGGCCCGCCAGCACGGCATGGCCGGCGAGGAGCCC CAGGCGAAGGTGCGCGCCTACCTGCGCGAGCAGGGCATGAGCGAGGTGGATGTGCAGCGCCAGGGCGACAGTCTCCTGCT CGGCGGCTACCTGGAGGACAACGCCCGGCGCCTGGCGCTACAGCGCTACCTCGATGGCAGCGGCGTGGACTACCGACTGG AAGCACGGAGCATGGAAGACATTCGCCAGGGCGTGGATTTCATCCTGCAGAAATTCGGCTATCGGCAGATCCTCAGCAGC AACGCGGACAAGCCTGGCTGGGTCCGGCTCAACGGCGAACTGGCGGAACAGGACGAACGCTGGGCGCGGATCGACGCATT GCTGGAGTCCGAGGTGCCGGGCCTGCTCGGGGTGGAAAACCAGGTCCGGGTGGCCGGCTCGCACCTGCGCCGCCTCGAGC GCCTGCTGGCGGACGCCGGCCTCGACCGGCAACTGAGTTTCCGCGAGCGCGGCGAGCGCATCGAGTTGAGCGGCACGCTC GACGAGGTCCAGCTCAGCGCCTTCTACCGCCTGCAGCGCGAGTTCCAGCAGGAATTCGGCAACCGCCCGAGCCTGGAGCT GCTCAGTCGCGGCAAGCGCGCCAGCGGCGACGAACTGGAGTTCACGATTCGCTCGGTGTCGCTGGGGCGGGTGCCCTATG TAGTGCTCGGCGACGGCCAGAAATACCCGGTGGGCGCCTCGACATCCCGCGGTGTGCGAATCCTCGCCATCGAGCCGGAG TCGATCCTGGTGGCCCGCGGCAAGCAGCGTTTCATCATCAATCTCAAAGGGGAGGTGCTCCATGATGACAGCCTTGGAAA CGCGACTGTCGGTCGCTGA Protein sequence : MAWKIRFYSGLNQGAEVSLGEGRVALGSDPLQADLVLLDEGIAAVHLVLEVDAQGVRLLEWAEGCEPRQDGQAQVAGAIL QALAGQTCGPLRWAFCDPQRSFPERFPEAEVQTAPVRRKSSARAGGAWLLGVSLALALCLLGMLVEPWSARQHGMAGEEP QAKVRAYLREQGMSEVDVQRQGDSLLLGGYLEDNARRLALQRYLDGSGVDYRLEARSMEDIRQGVDFILQKFGYRQILSS NADKPGWVRLNGELAEQDERWARIDALLESEVPGLLGVENQVRVAGSHLRRLERLLADAGLDRQLSFRERGERIELSGTL DEVQLSAFYRLQREFQQEFGNRPSLELLSRGKRASGDELEFTIRSVSLGRVPYVVLGDGQKYPVGASTSRGVRILAIEPE SILVARGKQRFIINLKGEVLHDDSLGNATVGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lscD | AAO18032.1 | LscD | Virulence | TTSS locus | Protein | 4e-101 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pscD | YP_005975914.1 | type III export protein PscD | VFG0212 | Protein | 0.0 | 99 |
| pscD | YP_005975914.1 | type III export protein PscD | VFG0403 | Protein | 2e-77 | 43 |
