Gene Information

Name : pscL (PAM18_3321)
Accession : YP_005975906.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3713767 - 3714411 bp
Length : 645 bp
Strand : -
Note : -

DNA sequence : 
ATGCTTCCATTTGTTGAACTAGACGCCAGTCGCGTACGGCTGGCCCCCGGGCAGGCCCTGTTGCGCGCCCGCGACTACCA
GGACTACCTCAGCGCCAACCGCCTGGTGGAAGCGGCCCGCGAGCGTGCCGCCGAAATCGAGCGCGAGGCCCACGAGGTTT
ACCAGGAGCAGAAGCGCCTGGGCTGGGAGGCCGGACTGGAGGAGGCGCGTCTGCGCCAGGCCGGGCTGATCCAGGAAACG
CTACTGCGCTGCAATCGCTACTACCGGCAGGTCGATCGCCAGCTTGGCGAGGTGGTGCTGCAGGCGGTGCGCAAGGTGTT
GCGCCACTACGACGCTGTCGAGCTGACCCTGGCGGCCACGCGCGAGGCACTGGCATTGGTGAGCAACCAGAAGCAGGTGA
TCCTGCACGTCCAGCCGGAACAACTGGCCGCGGTGCGCGAGCAGGTCGCCCGGGTGCTCAAGGATTTCCCCGAGGTGGGC
TACCTGGAAGTGGTCGGCGATGCCCGGTTGGACCAGGGCGGTTGCATCCTGGAAACCGAGATCGGGATCATCGACGCTTC
GCTCGACAGCCAGTTGGCGGCGTTGCAGGCCGCATTGACGGAGAGCGTGGCGCGGAGCGGCGAGGAGGAAGGGGACGCCG
GTTGA

Protein sequence : 
MLPFVELDASRVRLAPGQALLRARDYQDYLSANRLVEAARERAAEIEREAHEVYQEQKRLGWEAGLEEARLRQAGLIQET
LLRCNRYYRQVDRQLGEVVLQAVRKVLRHYDAVELTLAATREALALVSNQKQVILHVQPEQLAAVREQVARVLKDFPEVG
YLEVVGDARLDQGGCILETEIGIIDASLDSQLAALQAALTESVARSGEEEGDAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18079.1 LscL Not tested TTSS locus Protein 4e-45 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pscL YP_005975906.1 type III secretion system protein VFG0220 Protein 4e-71 100
pscL YP_005975906.1 type III secretion system protein VFG0411 Protein 4e-44 59
pscL YP_005975906.1 type III secretion system protein VFG0049 Protein 6e-17 42