Gene Information

Name : PAM18_3245 (PAM18_3245)
Accession : YP_005975830.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : putative two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3627332 - 3628039 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGGACTGCCCTACCCTCAGCAAGGTATTGCTCGTCGAAGACGACCAGAAGCTCGCCCGCCTGATCGCCAGTTTCCTTTC
CCAGCATGGTTTCGAAGTGCGCCAGGTGCATCGCGGTGATGCCGCGTTCGCCGCCTTCCTCGACTTCAAACCGCAAGTGG
TGGTTCTCGACCTCATGCTCCCCGGACAGAATGGTCTGCAGGTGTGCCGGGAGATCCGCCGGGTCGCGAACCTGCCGATC
CTCATACTCACCGCCCAGGAGGACGATCTCGATCACATCCTCGGCCTGGAGTCCGGCGCCGACGACTACGTGATCAAGCC
GATCGAGCCACCGGTGCTGCTCGCCCGCCTGCGCGCCCTGATGCGCCGGCACGCGCCCCTTCCCGCCTCCCCGGAAAGCC
TGACATTCGGCAAGCTGAACATCGACCGACGGCGGCGCGAAGCGGAACTCGAAGGCCTCGGCATCGAACTGACCACGATG
GAGTTCGAGCTGCTCTGGCTGCTGGCCAGCCAGGCAGGGGAAATACTTTCCCGCGACGAGATCCTCAACCAGATCCGCGG
CATCGGCTTCGACGGCCTGAACCGCAGCGTCGACGTCTGCATCAGCAAGCTGCGCAATAAACTGAAGGACAATCCGCGCG
AGCCGGTCCGGATCAAGACCGTCTGGGGCAAGGGCTACCTGTTCAACCCGCTGGGCTGGGAGCTCTGA

Protein sequence : 
MDCPTLSKVLLVEDDQKLARLIASFLSQHGFEVRQVHRGDAAFAAFLDFKPQVVVLDLMLPGQNGLQVCREIRRVANLPI
LILTAQEDDLDHILGLESGADDYVIKPIEPPVLLARLRALMRRHAPLPASPESLTFGKLNIDRRRREAELEGLGIELTTM
EFELLWLLASQAGEILSRDEILNQIRGIGFDGLNRSVDVCISKLRNKLKDNPREPVRIKTVWGKGYLFNPLGWEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_3245 YP_005975830.1 putative two-component response regulator CP000034.1.gene3671. Protein 3e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_3245 YP_005975830.1 putative two-component response regulator VFG0596 Protein 1e-21 41