Gene Information

Name : PAM18_3061 (PAM18_3061)
Accession : YP_005975646.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : putative aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3414144 - 3415664 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence :
ATGATCTACGCAGCGCCCGGAACCCCCGGTGCCGTCGTCACCTTCAAGCCTCGCTACGGCAACTACATCGGCGGCGAGTT
CGTGCCTCCGGTCAAGGGCCAGTACTTCACCAACACCTCGCCGGTGAACGGCCAGCCGATCGCCGAGTTCCCCCGTTCCA
CCGCCGAGGACATCGACAAGGCCCTCGATGCCGCCCACGCCGCCGCCGACGCCTGGGGCCGTACCTCGGTGCAGGAGCGT
TCGAACATCCTGCTGAAGATCGCCGACCGCATCGAGCAGAACCTGGAACTGCTCGCCGTCACCGAGACCTGGGACAACGG
CAAGGCCGTGCGCGAGACCCTCAACGCCGACATCCCCCTGGCCGCCGACCACTTCCGCTACTTCGCCGGCTGCATCCGCG
CCCAGGAAGGCTCCGCCGCCGAGATCAACGACAGCACCGTGGCCTACCACATCCATGAGCCGCTGGGCGTGGTCGGGCAG
ATCATCCCGTGGAACTTCCCGCTGCTGATGGCCGCCTGGAAGCTGGCCCCGGCGCTGGCCGCCGGCAACTGCGTGGTGCT
CAAGCCGGCCGAGCAGACCCCGCTGGGCATCTGCGTGCTGCTGGAAGTCATCGGCGACCTGCTGCCGCCGGGCGTGCTCA
ACGTCGTCCAGGGCTTCGGCAGGGAGGCCGGCGAGGCCCTGGCCACCAGCAAGCGCATCGCCAAGATCGCCTTCACCGGT
TCCACCCCGGTCGGCTCGCACATCCTCAAGTGCGCGGCGGAGAACATCATTCCCTCCACCGTCGAGCTGGGCGGCAAGAG
CCCGAACATCTATTTCGAAGACATCATGCAGGCCGAGCCGGCGTTCATCGAGAAGGCCGCCGAGGGCCTGGTGCTGGCCT
TCTTCAACCAGGGCGAGGTGTGCACCTGCCCGTCCCGCGCGCTGGTCCAGGAGTCGATCTACCCGGCATTCATGGAAGAG
GTGCTGAAAAAGGTCAGGGCGATCAAGCGCGGCGACCCGCTGGACACCGAGACCATGGTCGGCGCCCAGGCTTCCCAGCA
GCAGTACGAGAAGATCCTCTCCTACCTCGACATCGCCCAGCAGGAAGGCGCCGAGCTGCTCGCCGGCGGCAGCGTCGAGA
AGCTCGAAGGCAACCTGGCCAGCGGCTACTACATCCAGCCGACCCTGCTCAAGGGGCACAACGGCATGCGCGTGTTCCAG
GAGGAAATCTTCGGCCCGGTGGTCGGCGTCACCACCTTCAAGGACGAAGCCGAGGCCCTGGCCATCGCCAACGACACCGA
GTACGGCCTCGGCGCCGGCCTCTGGACCCGCGACATCAACCGCGCCTACCGCATGGGCCGCGGGATCAAGGCCGGTCGCG
TGTGGACCAACTGCTACCACCTGTACCCGGCCCACGCCGCGTTCGGCGGCTACAAGAAGTCCGGCGTCGGTCGCGAGACG
CACAAGATGATGCTCGACCACTACCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAACCCGCTGGGCTTCTTCTG
A

Protein sequence :
MIYAAPGTPGAVVTFKPRYGNYIGGEFVPPVKGQYFTNTSPVNGQPIAEFPRSTAEDIDKALDAAHAAADAWGRTSVQER
SNILLKIADRIEQNLELLAVTETWDNGKAVRETLNADIPLAADHFRYFAGCIRAQEGSAAEINDSTVAYHIHEPLGVVGQ
IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLGICVLLEVIGDLLPPGVLNVVQGFGREAGEALATSKRIAKIAFTG
STPVGSHILKCAAENIIPSTVELGGKSPNIYFEDIMQAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALVQESIYPAFMEE
VLKKVRAIKRGDPLDTETMVGAQASQQQYEKILSYLDIAQQEGAELLAGGSVEKLEGNLASGYYIQPTLLKGHNGMRVFQ
EEIFGPVVGVTTFKDEAEALAIANDTEYGLGAGLWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET
HKMMLDHYQQTKNLLVSYDINPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-149 67
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 3e-157 66
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 3e-157 66
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 3e-157 66
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-156 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_3061 YP_005975646.1 putative aldehyde dehydrogenase VFG0082 Protein 7e-150 67