Gene Information

Name : PAM18_2106 (PAM18_2106)
Accession : YP_005974692.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Resistance
Product : putative ATP-binding component of ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2308131 - 2308814 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGCCAGCATTCTCAACGCGCAGAACCTTAGCAAGGTTGTCGGTAGCGCGGAAGGCAAGTTGACCATCCTCCACGA
CCTCTCCCTCGACCTCGCCCGCGGCGACAGCCTGGCGATCGTCGGCAGTTCCGGCTCCGGCAAGTCGACCCTGCTCGGCC
TGCTCGCCGGGCTCGACCAGCCCAGCGGCGGCGAGGTCCGTCTCGCCGGGCACGCCCTCGGCGACCTCGACGAGGACCAG
CGTGCGCGCGTCCGCGCGGCCCATGTAGGCTTCGTGTTCCAGTCGTTCCAGTTGCTCGACAGCCTCGATGCGCTGGAGAA
CGTGATGCTGCCCCTGGAGCTGGAAGGCCGCGCCGACGCTCGCCAGCGCGCCAGAGAACTGCTCGAGCGAGTCGGCCTCG
GCCAACGCCTGGGCCACTATCCGCGCCAGCTCTCCGGCGGCGAGCAGCAGCGGGTCGCCATTGCCCGTGCCTTCGCGGCG
GAGCCGGACGTGCTGTTCGCCGACGAACCCACCGGCAACCTCGACAGCGCCACCGGCGAGCGGATCAGCGACCTGCTCTT
CGAACTCAACCGCGAACGCGGTACCACCCTGGTCCTGGTTACCCACGACGAGCGTCTGGCGCATCGCTGCCGGCGCCTGA
TCCGTCTGGAAAGCGGACGCCTGATCGACCGGGTCGAACCCTGA

Protein sequence :
MSASILNAQNLSKVVGSAEGKLTILHDLSLDLARGDSLAIVGSSGSGKSTLLGLLAGLDQPSGGEVRLAGHALGDLDEDQ
RARVRAAHVGFVFQSFQLLDSLDALENVMLPLELEGRADARQRARELLERVGLGQRLGHYPRQLSGGEQQRVAIARAFAA
EPDVLFADEPTGNLDSATGERISDLLFELNRERGTTLVLVTHDERLAHRCRRLIRLESGRLIDRVEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-26 43
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-22 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-27 41
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 1e-10 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_2106 YP_005974692.1 putative ATP-binding component of ABC transporter NC_008702.1.4606598. Protein 2e-30 48
PAM18_2106 YP_005974692.1 putative ATP-binding component of ABC transporter NC_012469.1.7686878. Protein 7e-33 45