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Name : xcpS (PAM18_1861) Accession : YP_005974449.1 Strain : Pseudomonas aeruginosa M18 Genome accession: NC_017548 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 2038377 - 2039594 bp Length : 1218 bp Strand : + Note : - DNA sequence : ATGGCCGCCTTCGAATACCTCGCCCTCGACCCCAGCGGTCGCCAGCAGAAGGGCGTGCTGGAGGCGGACAGCGCGCGCCA GGTCCGCCAGTTGCTGCGCGAGCGCCAATTGGCGCCGCTCGACGTGAAGCCCACCCGTACCCGCGAGCAGAGCGGGCAGG GCGGGCGCCTGACGTTCGCCCGCGGACTGTCCGCGCGCGACCTGGCATTGGTGACCCGGCAACTGGCGACCCTGGTCCAG GCCGCGTTGCCGATCGAGGAGGCGCTGCGCGCCGCCGCGGCGCAGTCCACCTCGCAGCGCATCCAGTCGATGCTTCTCGC GGTGCGCGCCAAGGTCCTCGAAGGCCATAGCCTGGCCGGCAGCCTGCGCGAGTTTCCCACCGCCTTTCCCGAGCTGTACC GGGCGACTGTGGCTGCCGGCGAGCATGCCGGGCACCTCGGCCCGGTGCTGGAGCAACTTGCCGACTACACCGAGCAGCGC CAGCAGTCGCGGCAGAAGATCCAGCTGGCGCTGCTCTATCCGGTGATCCTGATGGTCGCTTCGCTGGCCATCGTCGGCTT CCTGCTGGGCTACGTGGTGCCCGACGTGGTCCGGGTGTTCATCGACAGCGGGCAGACCCTGCCGCTGTTGACCCGCGTGC TGATCGGCGTCAGCGACTGGGTCAAGGCCTGGGGCGCGCTGGCCTTCGTCGCGGCGATCGGCGGCGTGATCGGCTTCCGC TACGCGCTGCGCAAGGATGCCTTTCGCGAGCGCTGGCATGGCTTCCTGCTGCGCGTGCCGCTGGTCGGTCGGCTGGTGCG TTCCACCGACACCGCGCGCTTCGCCTCGACCCTGGCGATCCTCACCCGCAGCGGCGTGCCGCTGGTGGAGGCGCTGGCGA TCGCCGCCGAGGTGATCGCCAACCGGATCATCCGCAACGAAGTGGTCAAGGCCGCGCAGAAGGTCCGCGAGGGCGCCAGC CTGACCCGCTCGCTGGAAGCCACCGGACAGTTCCCGCCGATGATGCTGCACATGATCGCCAGCGGCGAGCGCTCCGGCGA GCTGGACCAGATGCTGGCGCGCACCGCGCGCAACCAGGAGAACGACCTGGCGGCGCAGATCGGCCTGATGGTCGGCCTGT TCGAACCGTTCATGCTGATATTCATGGGCGCGGTGGTGCTGGTCATCGTCCTTGCCATTCTTCTTCCGATCCTTTCTCTC AACCAACTCGTGGGGTAA Protein sequence : MAAFEYLALDPSGRQQKGVLEADSARQVRQLLRERQLAPLDVKPTRTREQSGQGGRLTFARGLSARDLALVTRQLATLVQ AALPIEEALRAAAAQSTSQRIQSMLLAVRAKVLEGHSLAGSLREFPTAFPELYRATVAAGEHAGHLGPVLEQLADYTEQR QQSRQKIQLALLYPVILMVASLAIVGFLLGYVVPDVVRVFIDSGQTLPLLTRVLIGVSDWVKAWGALAFVAAIGGVIGFR YALRKDAFRERWHGFLLRVPLVGRLVRSTDTARFASTLAILTRSGVPLVEALAIAAEVIANRIIRNEVVKAAQKVREGAS LTRSLEATGQFPPMMLHMIASGERSGELDQMLARTARNQENDLAAQIGLMVGLFEPFMLIFMGAVVLVIVLAILLPILSL NQLVG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 4e-56 | 46 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-56 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcpS | YP_005974449.1 | general secretion pathway protein F | VFG0181 | Protein | 1e-155 | 100 |
| xcpS | YP_005974449.1 | general secretion pathway protein F | VFG2049 | Protein | 5e-55 | 46 |
| xcpS | YP_005974449.1 | general secretion pathway protein F | VFG1870 | Protein | 2e-65 | 43 |
