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Name : wbpM (PAM18_1822) Accession : YP_005974410.1 Strain : Pseudomonas aeruginosa M18 Genome accession: NC_017548 Putative virulence/resistance : Virulence Product : nucleotide sugar epimerase/dehydratase WbpM Function : - COG functional category : - COG ID : - EC number : - Position : 1993646 - 1995610 bp Length : 1965 bp Strand : + Note : - DNA sequence : TTGCCGCGCCGCCAGAAGCGCATTCTTCAGGTTGCGACGGACATCGGCCTGGTGTGGCTTTCATTGTGGCTGGCTTTCCT GGTGCGTCTCGGCACCGAAGACATGATCGATCCGTTCGGGGATCACGCCTGGCTGTTCATAGCGGCGCCTCTAACCGCCA TCCCGCTCTTCATCCGCTTCGGCATGTACCGGGCGGTGATGCGCTACCTGGGCAACGACGCCCTTATCGCGATCGCCAAG GCCGTCACCATTTCCGCGCTGGTCCTGTCGTTGCTGGTCTACTGGTACCGCTCCCCGCCGGCGGTGGTGCCCCGTTCCCT GGTGTTCAACTACTGGTGGTTGAGCATGCTGCTGATCGGCGGCTTGCGTCTGGCCATGCGCCAGTATTTCATGGGCGACT GGTACTCTGCTGTGCAGTCGGTACCATTTCTCAATCGCCAGGATGGCCTGCCCAGGGTGGCCATCTATGGCGCGGGGGCG GCCGGCAACCAGTTGGTTGCGGCATTGCGTCTCGGTCGGGCGATGCGTCCGGTGGCGTTCATCGATGACGACAAGCAGAT TGCCAACCGGGTCATCGCCGGTCTGCGGGTCTATACCGCCAAGCATATCCGCCAGATGATCGACGAGACGGGCGCGCAGG AGGTTCTCCTGGCGATTCCTTCCGCCACTCGGGCCCGGCGCCGAGAGATTCTCGAGTCCCTGGAGCCGTTCCCGCTGCAC GTGCGCAGCATGCCTGGCTTCATGGACCTGGCCAGCGGTCGGGTCAAGGTGGACGACCTGCAGGAGGTGGACATCGCTGA CCTGCTGGGGCGCGACAGCGTCGCACCGCGCAAGGAGCTGCTGGAACGGTGCATCCGCGGTCAGGTGGTGATGGTGACCG GGGCGGGCGGTTCTATCGGTTCGGAACTCTGTCGGCAGATCATGAGTTGTTCGCCTAGCGTGCTGATCCTGTTCGAGCAC AGCGAATACAACCTCTACAGCATCCATCAGGAACTGGAGCGTCGGATCAAGCGCGAGTCGCTTTCGGTGAACCTGTTGCC GATCCTCGGTTCGGTGCGCAATCCCGAGCGCCTGGTGGACGTGATGCGTACCTGGAAGGTCAATACCGTCTACCATGCGG CGGCCTACAAGCATGTGCCGATCGTCGAGCACAACATCGCCGAGGGCGTTCTCAACAACGTGATAGGCACCTTGCATGCG GTGCAGGCCGCGGTGCAGGTCGGCGTGCAGAACTTCGTGCTGATTTCCACCGACAAGGCGGTGCGGCCGACCAATGTGAT GGGCAGCACCAAGCGCCTGGCGGAGATGGTCCTTCAGGCGCTCAGCAACGAATCGGCACCGGTGCTGTTCGGCGATCGGA AGGACGTGCATCACGTCAACAAGACCCGTTTCACCATGGTCCGCTTCGGCAACGTCCTCGGTTCGTCCGGTTCGGTCATT CCGCTGTTCCGCGAGCAGATCAAGCGCGGCGGCCCGGTGACGGTCACCCACCCGAGCATCACCCGTTACTTCATGACCAT TCCCGAGGCGGCGCAGTTGGTCATCCAGGCCGGTTCGATGGGGCAGGGCGGAGATGTATTCGTGCTGGACATGGGGCCGC CGGTGAAGATCCTGGAGCTCGCCGAGAAGATGATCCACCTGTCCGGCCTGAGCGTGCGTTCCGAGCGTTCGCCCCATGGT GACATCGCCATCGAGTTCAGTGGCCTGCGTCCTGGCGAGAAGCTCTACGAAGAGCTGCTGATCGGTGACAACGTGAATCC CACCGACCATCCGATGATCATGCGGGCCAACGAGGAACACCTGAGCTGGGAGGCCTTCAAGGTCGTGCTGGAGCAGTTGC TGGCCGCCGTGGAGAAGGACGACTACTCGCGGGTTCGCCAGTTGCTGCGGGAAACCGTCAGCGGCTATGCGCCTGACGGT GAAATCGTCGACTGGATCTATCGCCAGAGGCGGCGAGAACCCTGA Protein sequence : MPRRQKRILQVATDIGLVWLSLWLAFLVRLGTEDMIDPFGDHAWLFIAAPLTAIPLFIRFGMYRAVMRYLGNDALIAIAK AVTISALVLSLLVYWYRSPPAVVPRSLVFNYWWLSMLLIGGLRLAMRQYFMGDWYSAVQSVPFLNRQDGLPRVAIYGAGA AGNQLVAALRLGRAMRPVAFIDDDKQIANRVIAGLRVYTAKHIRQMIDETGAQEVLLAIPSATRARRREILESLEPFPLH VRSMPGFMDLASGRVKVDDLQEVDIADLLGRDSVAPRKELLERCIRGQVVMVTGAGGSIGSELCRQIMSCSPSVLILFEH SEYNLYSIHQELERRIKRESLSVNLLPILGSVRNPERLVDVMRTWKVNTVYHAAAYKHVPIVEHNIAEGVLNNVIGTLHA VQAAVQVGVQNFVLISTDKAVRPTNVMGSTKRLAEMVLQALSNESAPVLFGDRKDVHHVNKTRFTMVRFGNVLGSSGSVI PLFREQIKRGGPVTVTHPSITRYFMTIPEAAQLVIQAGSMGQGGDVFVLDMGPPVKILELAEKMIHLSGLSVRSERSPHG DIAIEFSGLRPGEKLYEELLIGDNVNPTDHPMIMRANEEHLSWEAFKVVLEQLLAAVEKDDYSRVRQLLRETVSGYAPDG EIVDWIYRQRRREP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-85 | 42 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-81 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| wbpM | YP_005974410.1 | nucleotide sugar epimerase/dehydratase WbpM | VFG0029 | Protein | 1e-118 | 46 |
