Gene Information

Name : PAM18_1813 (PAM18_1813)
Accession : YP_005974401.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase-like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1982086 - 1983354 bp
Length : 1269 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGGATCTGAAGGTTGCAGTTGTTGGGCTAGGCTATGTTGGTCTTCCGCTTGCTGTTGAATTTGGTAAAAAACGAAC
CGTTGTCGGTTTCGATATCAATCAGGGGCGAATCGCTGAACTGCGGCAAGGCATTGACTCTACTCTTGAAGTAGATGCGG
CTGAGTTGAAAGAAGCGTCCGAACTGAGCTTTACTTTCAATCTTCAGGACTTGCAAAAGTGCAATGTTTTCATTGTGACG
GTTCCTACACCTATTGATGAACATAAGCAACCCGACCTCACCCCTCTTGTAAAGGCCTCGGAGAGCATCGGAAAGGTTCT
GAAGAAGGGCGATATTGTAATTTATGAGTCTACCGTTTACCCGGGAGCGACGGAAGAAGACTGCGTACCTGTTCTGGAAA
AATTTTCCGGGCTGAGGTTTAACGAGGACTTCTTCGCCGGTTATAGCCCCGAGCGCATCAATCCCGGCGATAAGGAACAT
CGGGTCTCTTCGATCAAGAAGGTCACTTCCGGCTCTACGCCGGAGATCGCGGAGTTGGTTGACTCCCTGTATAGAGAAAT
CATCACTGCCGGTACTCACAAGGCGAGCAGCATTAAAGTCGCTGAGGCTGCCAAGGTGATCGAAAATACGCAGCGAGATC
TCAATATTGCTCTGATCAACGAACTCGCCATCATTTTCAATCGAATGGGTATCGATACCGAGGCGGTCCTCAAGGCTGCC
GGCACGAAATGGAATTTCATGCCGTTCCGCCCGGGCCTAGTCGGCGGTCATTGCATCGGAGTCGATCCATATTATCTGAC
TCATAAAGCCCAGAGTATTGGCTATCATCCAGAGATCATCCTGGCTGGCCGCCGTTTGAATGACGGTATGGGTGCCTATG
TCGTTTCGCAACTGGTCAAGGCTATGCTCAAGCGTCGTATCCACGTGGACGGTGCTCGCGTTCTGCTTATGGGGCTTACA
TTCAAGGAAAATTGTCCAGACCTCCGCAATACCAAAGTCGTCGATATTGTCCGTGAGTTGGCGGAATACAACATACAGGT
TGATGTTTTTGATCCTTGGGTGAGCGCCGAAGATGCCATGCATGAGTATGGGATTACTCCAGTCGGTACGCCATCCCATG
GCGCTTATGATGGAATTATCCTTGCGGTCGCGCACAGTGAATTCAAAAATATGGGCGCAGAAAATATACGAAAGTTAGGG
AAGGCTGAGCATGTTCTCTATGATCTGAAATATCTACTCGATGAAGATAAGTCTGATCTACGCCTGTAA

Protein sequence : 
MKDLKVAVVGLGYVGLPLAVEFGKKRTVVGFDINQGRIAELRQGIDSTLEVDAAELKEASELSFTFNLQDLQKCNVFIVT
VPTPIDEHKQPDLTPLVKASESIGKVLKKGDIVIYESTVYPGATEEDCVPVLEKFSGLRFNEDFFAGYSPERINPGDKEH
RVSSIKKVTSGSTPEIAELVDSLYREIITAGTHKASSIKVAEAAKVIENTQRDLNIALINELAIIFNRMGIDTEAVLKAA
GTKWNFMPFRPGLVGGHCIGVDPYYLTHKAQSIGYHPEIILAGRRLNDGMGAYVVSQLVKAMLKRRIHVDGARVLLMGLT
FKENCPDLRNTKVVDIVRELAEYNIQVDVFDPWVSAEDAMHEYGITPVGTPSHGAYDGIILAVAHSEFKNMGAENIRKLG
KAEHVLYDLKYLLDEDKSDLRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-136 67
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 2e-136 67
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-108 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_1813 YP_005974401.1 UDP-glucose/GDP-mannose dehydrogenase-like protein VFG0431 Protein 7e-137 67