Gene Information

Name : PAM18_1256 (PAM18_1256)
Accession : YP_005973845.1
Strain : Pseudomonas aeruginosa M18
Genome accession: NC_017548
Putative virulence/resistance : Resistance
Product : putative metal-transporting P-type ATPase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1374169 - 1376385 bp
Length : 2217 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCACGAACACGCCGACACTTGCTGTCACGGTCACGGACATGATCATGGGCACCGCCACGCGCCTCGCCCGGCGGT
GGCCGCCATCGGAACCCTGGCCGGCAACGCCGAGTTGCGCTGGAGCGACCTGCGCATCGAAGCGATGGACTGCCCGACCG
AGGAGCGCCTGATCCGCGACGCCCTCGGTCGCCAGCCGGCAGTGGAGTCGCTGGAATTCAACCTGATGCAGCGCCTGCTG
CGCGTCCAGCATCGCTTCGACAGCGTCGAGCCGCTGCAGAAGCTGATCGCCGGCCTCGGCATGCAAGCGGTGCCGCTGGA
TGCCGGCGAAAATACCGACGGCCCCTCGCAAGCGCCGGCGAAACCCTGGTGGCCGCTGGCCCTGGCCGGCGCGATGGCGC
TGGCCTCGGAGATCGTCGAATGGTTCGGCCTGGCGCCGGACTGGGTGGTCGCCGGCCTCGCCCTGCTGGCCATCCTCGGC
GCCGGCCTGCCGACCTACCGCAAGGGCTGGATCGCCCTGAAGAACCGCAACCTGAACATCAACGCCCTGATGAGCATCGC
CGTGACCGGCGCCGTGCTCATCGGCCAGTGGCCGGAAGCGGCGATGGTCAGCGTGCTGTTCGCCATCGCCGAGCTGATCG
AGGCGAAGTCCCTGGATCGCGCGCGCAACGCCATCCGCGGCCTGCTGCAACTGGCTCCGGAACAGGCCACGGTACTGGTC
GGCGGCGAATGGAAGGAGCTGCCGGCCAAGCAAGTGGAACTGGAAGCCACCGTGCGCGTGAAGCCCGGCGAACGCATCGC
CCTCGACGGCGAGGTGACCAGCGGCCGCTCCAGCGTCAACCAGGCGCCGATCACCGGCGAAAGCCTGCCGGTGGAGAAGG
AGGTCGGCGAGCCGGTGTTCGCCGGCAGCATCAACGGCGAGGGCGCGCTGGAGTACCGCGTCACCCGCCGCGCCGACGAC
AGCACCCTGGCCCGGATCATCCACGCCGTGGAGGAAGCCCAGGGTTCCCGCGCACCGACCCAGCGTTTCGTCGACAGTTT
CGCCCGCGTCTACACCCCGGTGGTATTCCTCATCGCCCTCGCCACCGCGGTGCTGCCGCCGCTGCTATTCGGCGGCGCCT
GGCTGGACTGGATCTACCGCGCCCTGGTGCTGCTGGTGATCGCCTGTCCCTGCGCGCTGGTGATCTCCACCCCGGTGACC
ATCGTCAGCGGCCTTTCCGCCGCGGCGCGCCTGGGCATCCTGATCAAGGGCGGGGTGTTCCTCGAACTCGGGCGCAAGCT
GTCCTGGGTCGCCCTCGACAAGACCGGCACCATCACCCATGGCAAACCGCAACAGACCGACTACCTGCCGATCGCGGAGG
CTGACGGGACGGATGCGCGCCTGCTCGCCGCCAGCCTGGCCGCGCGTTCCGACCACCCGGTATCGCGCGCCGTGGCCAAC
GCAGCGGAAGAGGACGGCCTTGCCCTGGGCGTGGTCGAGGACCTCGCTGCCTTGCCGGGACGAGGCGTCAGCGGACGCAT
CGACGGCGTCCTCTACCACCTCGGCAACCATCGCCTGGTGGAGGAACTGGGCCTCTGCTCGCCGGCCCTGGAAGAGCGCC
TGGACGCCCTGGAGCGCCAGGGCAAGACGGTCATCGCGCTGTGCGATCCGCAGCGCGTGCGGGCCCTCTTCGCCGTCGCC
GACGGGGTCAAGGACAGCAGCCGCGAGGCGATCCACGAGCTGCACGCGCTGGACGTGAAGACCCTGATGCTCACCGGCGA
CAACCCGCACACCGCAGCCGCCATCGCTGCCCAGGTAGGCATCGACGCAGCTCGCGGCAACCTCCTGCCGGAGGACAAGC
TGCGTGAAGTGGAAGCGCGCCAGGCCGACGGCTCGCGGGTCGGCATGGTCGGCGACGGGATCAACGACGCGCCGGCCCTG
GCCCGCGCCGACATCGGCTTCGCCATGGGCGCGGCGGGCACCGACACGGCCATCGAGACCGCCGGCGTCGCGCTGATGGA
CGACGACCTGCGCAAGTTGCCGCAATTCATCCGGCTGTCGCGCACCACCCACGCGATCCTGGTCCAGAACATCACCCTGG
CCCTGGGCATCAAGGCGGTGTTCCTCGCCCTTACCCTGGCAGGCGAAGGCACCCTGTGGATGGCGGTATTCGCCGACATG
GGCGCCAGCCTGCTGGTGGTGTTCAACGGTCTGCGACTGTTGCGCAAGCGTTTCTAA

Protein sequence :
MSHEHADTCCHGHGHDHGHRHAPRPAVAAIGTLAGNAELRWSDLRIEAMDCPTEERLIRDALGRQPAVESLEFNLMQRLL
RVQHRFDSVEPLQKLIAGLGMQAVPLDAGENTDGPSQAPAKPWWPLALAGAMALASEIVEWFGLAPDWVVAGLALLAILG
AGLPTYRKGWIALKNRNLNINALMSIAVTGAVLIGQWPEAAMVSVLFAIAELIEAKSLDRARNAIRGLLQLAPEQATVLV
GGEWKELPAKQVELEATVRVKPGERIALDGEVTSGRSSVNQAPITGESLPVEKEVGEPVFAGSINGEGALEYRVTRRADD
STLARIIHAVEEAQGSRAPTQRFVDSFARVYTPVVFLIALATAVLPPLLFGGAWLDWIYRALVLLVIACPCALVISTPVT
IVSGLSAAARLGILIKGGVFLELGRKLSWVALDKTGTITHGKPQQTDYLPIAEADGTDARLLAASLAARSDHPVSRAVAN
AAEEDGLALGVVEDLAALPGRGVSGRIDGVLYHLGNHRLVEELGLCSPALEERLDALERQGKTVIALCDPQRVRALFAVA
DGVKDSSREAIHELHALDVKTLMLTGDNPHTAAAIAAQVGIDAARGNLLPEDKLREVEARQADGSRVGMVGDGINDAPAL
ARADIGFAMGAAGTDTAIETAGVALMDDDLRKLPQFIRLSRTTHAILVQNITLALGIKAVFLALTLAGEGTLWMAVFADM
GASLLVVFNGLRLLRKRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C97 AAN62190.1 putative metal-transporting P-type ATPase Not tested PAGI-2(C) Protein 0.0 67
SE0075 NP_763630.1 cadmium resistance protein B Not tested SCCpbp4 Protein 1e-119 47
unnamed BAB47609.1 cadmium resistance protein B Not tested Type-III SCCmec Protein 5e-120 47
cadA BAC57487.1 Probable cadmium-transporting ATPase (Cadmium efflux ATPase) Not tested Type-IIIinv SCCmec Protein 5e-120 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PAM18_1256 YP_005973845.1 putative metal-transporting P-type ATPase BAC0298 Protein 0.0 69
PAM18_1256 YP_005973845.1 putative metal-transporting P-type ATPase BAC0461 Protein 9e-85 43
PAM18_1256 YP_005973845.1 putative metal-transporting P-type ATPase BAC0100 Protein 7e-61 42