|
Name : LMLG_1304 (LMLG_1304) Accession : YP_005972428.1 Strain : Listeria monocytogenes Finland 1988 Genome accession: NC_017547 Putative virulence/resistance : Unknown Product : K+-transporting ATPase subunit B Function : - COG functional category : - COG ID : - EC number : - Position : 2691689 - 2693734 bp Length : 2046 bp Strand : - Note : - DNA sequence : ATGATGGAAAAAGGTATTTGGAAAGATGCGCTGATTCAGTCGACGAAAAAACTGTCTCCAAAACTGCAAGTGAAAAATCC GGTGATGTTGCTTGTTTATGTTGGTGCGATTTTGGCAACGAGCCTTTATTTTCTCGGTTTCTTCGGGATTTCGGATGAGA AGTCTGGTTATACGCTAGCAATTGCGCTGATTTTATGGTTTACAGTGTTGTTTGCGAATTTTGCAGAGGCGATTGCGGAA GGTCGTGGTCGAGCACAGGCGGATAGTTTGAAAATGGCTCGAAAAGACGTTTTAGCTCGAAAATTAAAGAATGTTGATGA TAAAACTGATGTGATTGAAGTTGCTTCGAATGACTTGAAAAAAGGCGATATTGTGTATGTCCTTGCGAATGAACAAATAC CGATGGATGGCGAGGTCATTGAAGGTGCGGCTTCGGTTGATGAAAGTGCGATAACTGGGGAATCTGCACCAGTAATTCGA GAGTCTGGCGGGGATAGAAGTGCCGTGACGGGTGGAACTACACTTGTTTCCGATTGGCTGGTTGTTCGTGTAACGGCGGT CTCTGGAGAAAGTTTCTTAGATAAAATGATTGCGATGGTGGAAGGAGCTTCACGGAAAAAGACGCCGAATGAGATTGCTT TACAAATTTTACTTGTAACGCTTTCGATTATTTTTCTGGCGGTTTCAGCCACACTTTTACCATTTACTGAATTTGCGAGT AAGCAGGCGGGTGCTGGATCGGCAATTTCGATTACGAATGTGATTGCTTTGCTCGTTTGTTTGGCGCCAACTACGATTGG TGCACTACTTTCGTCGATTGGAATTGCAGGGATGAGTCGGTTAAATCAAGCGAATGTTTTAGCGATGAGTGGTCGTGCGA TTGAGGCAGCTGGCGATGTGGATGTGCTTTTGCTCGATAAAACTGGGACGATTACACTGGGAAACCGGAAAGCAAGCGAA TTTTTGCCTGTGGATGGTGTGACGGAACAAGAGCTGGCCGATGCGGCGCAACTTTCTTCGATTGCGGATGAAACGGCGGA AGGTCGCAGTATTGTTGTGTTGGCGAAAGAACGCTTTGATATTCGTGGTCGAGATTTTGCTGAAATGCACGCAGAATTCG TTCCTTTCACGGCAACAACGCGAATGAGTGGAATTGATTATCAAGAAAATACGATTCGAAAAGGCGCGGCGGATGCGGTT CGTGCATATGTAACGGCGAATGGTGGGACGTACCCCAAAGAGTGTGATGCGATTGTGAGTAAAGTTGCTGGAGCTGGTGG TACACCGCTTGTCGTTGTTCGTAACAATCAAGTGCTGGGCGTCATTTATTTAAAAGATATCGTGAAAAATGGTGTAAAAG AACGTTTTCTCGATTTACGAAAAATGGGTATTAAAACAATTATGATTACTGGCGATAATCCAATGACCGCAGCAGCAATT GCGGCAGAAGCAGGAGTCGATGATTTTCTAGCAGAAGCAACCCCAGAAGCAAAATTGGAATTAATTCGTGAATATCAACG GGAAGGCCATTTAGTGGCGATGACAGGAGACGGAACGAATGATGCGCCAGCTCTTGCGCAAGCGGATGTGGCGGTTGCGA TGAATACAGGAACACAAGCTGCAAAAGAAGCTGGGAATATGGTTGATCTGGATTCTAGTCCTACTAAATTAATTGATATT GTTCGGATTGGCAAACAACTGCTAATGACACGTGGGGCACTGACGACTTTTAGTGTTGCTAACGACTTAGCAAAATACTT TGCGATTATTCCGGTGTTATTTTACGGTATTTTTCCACAGCTTGAAGCGCTTAATTTAATGGGATTAACAAGCCCGACGA GCGCCATTTTATCCGCGATTATTTACAATGCGGTGATTATCATTGTTCTTATTCCGCTTTCTTTAAAAGGTGTGAAATAT CGTGAAATGCCTGCTGGAAAATTACTGAGCCGAAATATGTTGATTTATGGTCTGGGGGGGTTGATTGCTCCATTTATCGC GATTAAATTGATTGATATGCTATTAACTGTTCTAGGAATCGTTTAA Protein sequence : MMEKGIWKDALIQSTKKLSPKLQVKNPVMLLVYVGAILATSLYFLGFFGISDEKSGYTLAIALILWFTVLFANFAEAIAE GRGRAQADSLKMARKDVLARKLKNVDDKTDVIEVASNDLKKGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIR ESGGDRSAVTGGTTLVSDWLVVRVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILLVTLSIIFLAVSATLLPFTEFAS KQAGAGSAISITNVIALLVCLAPTTIGALLSSIGIAGMSRLNQANVLAMSGRAIEAAGDVDVLLLDKTGTITLGNRKASE FLPVDGVTEQELADAAQLSSIADETAEGRSIVVLAKERFDIRGRDFAEMHAEFVPFTATTRMSGIDYQENTIRKGAADAV RAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNQVLGVIYLKDIVKNGVKERFLDLRKMGIKTIMITGDNPMTAAAI AAEAGVDDFLAEATPEAKLELIREYQREGHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTKLIDI VRIGKQLLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPQLEALNLMGLTSPTSAILSAIIYNAVIIIVLIPLSLKGVKY REMPAGKLLSRNMLIYGLGGLIAPFIAIKLIDMLLTVLGIV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 0.0 | 73 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 0.0 | 73 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-145 | 56 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-145 | 56 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-145 | 56 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 6e-145 | 56 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 3e-145 | 56 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 4e-145 | 56 |
