Gene Information

Name : LMLG_0471 (LMLG_0471)
Accession : YP_005971773.1
Strain : Listeria monocytogenes Finland 1988
Genome accession: NC_017547
Putative virulence/resistance : Virulence
Product : ferrichrome transport ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2015867 - 2016691 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence :

ATGAAAGACCTTCATACAGATAACTTACAAATTTCATACGACAAACGAATCATTGTTGATGGTTTAGACATAGCCATTCC
AGCGAATAAAATAACCGCTTTAGTAGGTGCAAATGGTTCAGGGAAATCGACTATTTTAAAAACGATGTCCCGCTTAATGA
AACCTAGTAAAGGCGCTGTTTATTTAGACGGCAAAACGATTCATAGTCAGCCAACTAGAGACGTTGCCAAACAATTAGCT
ATTTTACCACAAAACCCTTCTGCACCTGATGGTTTGACGGTGTTTGAATTAATTTCTTATGGACGTTCTCCGCATCAAAG
TAGCTTTAAATCGATTACCGCAAAAGATCGCGAAATTATTTTTTGGTCATTGCGCGTGACGAATTTAACGGAGTTCGCGG
ATCGACCTATCGATAGTTTATCAGGCGGACAACGACAGCGTGCTTGGATTGCCATGGCGCTTGCCCAAGAAACAGATGTC
TTATTTCTTGATGAGCCGACTACCTTTTTAGATATGACACACCAACTAGATGTACTTAATTTATTGAAACAATTAAATCA
ATCAGAGAACCGCACAATCGTGATGGTTGTCCATGATTTAAATCACGCATCTCGTTACGCTCACCATATGATTGCTATTA
AAGAAGGAAAAGTCATTGCAGAAGGAACACCAACAAGCGTCATGACCGAACAAACTTTAGAGGATGTCTTTAATATCAAA
GCAGATATTTTAATTGACCCCCGCAGCGGTGTCCCTCTTTGCCTTCCATACGAAACTTGCAACGGATGCGAAATTGTAAA
GGAGCTTGATTCCATTGCCAAATGA

Protein sequence :

MKDLHTDNLQISYDKRIIVDGLDIAIPANKITALVGANGSGKSTILKTMSRLMKPSKGAVYLDGKTIHSQPTRDVAKQLA
ILPQNPSAPDGLTVFELISYGRSPHQSSFKSITAKDREIIFWSLRVTNLTEFADRPIDSLSGGQRQRAWIAMALAQETDV
LFLDEPTTFLDMTHQLDVLNLLKQLNQSENRTIVMVVHDLNHASRYAHHMIAIKEGKVIAEGTPTSVMTEQTLEDVFNIK
ADILIDPRSGVPLCLPYETCNGCEIVKELDSIAK

• Homologs from PAI DB

Gene	GenBank Accn	Product	Virulance or Resistance	PAI or REI	Alignment Type	E-val	Identity
SPN23F_09560	YP_002510939.1	ferric siderophore ABC transporter ATP-binding protein	Virulence	PPI-1	Protein	1e-58	49
SP_1035	NP_345510.1	iron-compound ABC transporter ATP-binding protein	Not tested	PPI-1	Protein	1e-58	49
DIP0585	NP_938961.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	3e-54	46
fecE	AAL08451.1	ATP-binding protein FecE	Virulence	SRL	Protein	1e-52	44
iusE	YP_005143742.1	iron ABC transporter ATP-binding protein	Virulence	Not named	Protein	2e-56	43
fagC	YP_005682397.1	ATP binding cytoplasmic membrane protein	Virulence	PiCp 1	Protein	7e-50	43
fagC	YP_005684488.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	7e-50	43
fagC	YP_005680307.1	ATP binding cytoplasmic membrane protein	Not tested	PiCp 1	Protein	7e-50	43
fagC	YP_003782430.1	ABC transporter ATP-binding protein	Not tested	PiCp 1	Protein	7e-50	43
ciuD	YP_003783391.1	iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	1e-51	42
ciuD	YP_005685432.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	1e-51	42
ciuD	YP_005681255.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	1e-51	42
ciuD	YP_005683346.1	Iron ABC transporter ATP-binding protein	Virulence	PiCp 4	Protein	1e-51	42

• Homologs from CARD and BacMet (resistance genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
LMLG_0471	YP_005971773.1	ferrichrome transport ATP-binding protein	BAC0164	Protein	9e-53	44

• Homologs from VFDB (virulence genes)

Gene	GenBank Accn	Product	ID of source DB	Alignment Type	E-val	Identity
LMLG_0471	YP_005971773.1	ferrichrome transport ATP-binding protein	VFG0925	Protein	7e-57	45
LMLG_0471	YP_005971773.1	ferrichrome transport ATP-binding protein	VFG1042	Protein	9e-53	44