Gene Information

Name : LMLG_2728 (LMLG_2728)
Accession : YP_005971318.1
Strain : Listeria monocytogenes Finland 1988
Genome accession: NC_017547
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1517942 - 1518628 bp
Length : 687 bp
Strand : +
Note : -

DNA sequence : 
ATGAAATTACTTATGATAGAAGATAATGTAAGTGTCTGTGAAATGATAGAAATGTTCTTTATGAAAGAAGAAATTGATGC
TACATTTGTTCATGATGGCAAAATGGGTTATGAAGCGTTTTTTAAAGATGATTATGATATTGCGATTATTGACCTAATGC
TTCCTAATATGGACGGAATGACCATTTGCCGTAAAATCCGTGAAGTAAGCGATGTGCCAATTATCATTTTAACGGCTAAA
GAGTCAGAATCCGATCAAGTGCTTGGTCTCGAAATGGGCGCAGATGACTATGTAACAAAACCATTTAGCCCACTTACTTT
AATGGCTCGAATTAAAGCTGTTACACGCCGCAAAAATAGTGCCACTTCTACAGAAAATAATGAAGATATCCTAGAAACAA
CTTATTTTAAAATTAGTAAACGCACACGCGAAATTTTTTATCAAGATGAGCTACTTGATGCTCTAACACCTAAAGAATTC
GATTTACTATATTTTTTGATGAAACATCCACGACAAGTGTTTTCAAGAGAACAATTGCTGGAACAAGTTTGGGGTTATCA
GTTCTACGGAGATGAGCGCACAGTGGACGTTCACATCAAACGTTTACGCCAAAAAATCGCCACCGAAACAAAGCCATTTT
TGCACACCGTCTGGGGTGTTGGCTACAAATTTGATGAAACGGAATGA

Protein sequence : 
MKLLMIEDNVSVCEMIEMFFMKEEIDATFVHDGKMGYEAFFKDDYDIAIIDLMLPNMDGMTICRKIREVSDVPIIILTAK
ESESDQVLGLEMGADDYVTKPFSPLTLMARIKAVTRRKNSATSTENNEDILETTYFKISKRTREIFYQDELLDALTPKEF
DLLYFLMKHPRQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRQKIATETKPFLHTVWGVGYKFDETE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 3e-35 47
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 8e-35 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_010400.5986590.p0 Protein 2e-37 45
LMLG_2728 YP_005971318.1 DNA-binding response regulator DQ212986.1.gene4.p01 Protein 3e-31 44
LMLG_2728 YP_005971318.1 DNA-binding response regulator AM180355.1.gene1830. Protein 1e-30 44
LMLG_2728 YP_005971318.1 DNA-binding response regulator CP001918.1.gene3444. Protein 1e-28 44
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_012469.1.7685629. Protein 2e-38 43
LMLG_2728 YP_005971318.1 DNA-binding response regulator AE016830.1.gene1681. Protein 3e-40 43
LMLG_2728 YP_005971318.1 DNA-binding response regulator HE999704.1.gene2815. Protein 4e-44 43
LMLG_2728 YP_005971318.1 DNA-binding response regulator AE015929.1.gene1106. Protein 4e-29 43
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_005054.2598277.p0 Protein 2e-34 43
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_014475.1.orf0.gen Protein 2e-34 43
LMLG_2728 YP_005971318.1 DNA-binding response regulator CP000647.1.gene2531. Protein 3e-28 43
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_010410.6002989.p0 Protein 1e-37 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_011595.7057856.p0 Protein 1e-37 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_012469.1.7686381. Protein 4e-41 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 6e-32 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 6e-32 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 6e-32 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 6e-32 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 6e-32 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 6e-32 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 6e-32 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 6e-32 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator FJ349556.1.orf0.gene Protein 4e-37 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator AF130997.1.orf0.gene Protein 8e-29 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator CP000034.1.gene2186. Protein 1e-28 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator NC_002695.1.916589.p Protein 1e-28 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator BAC0039 Protein 1e-28 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator BAC0596 Protein 5e-28 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator CP001138.1.gene2239. Protein 5e-28 42
LMLG_2728 YP_005971318.1 DNA-binding response regulator BAC0125 Protein 1e-26 41
LMLG_2728 YP_005971318.1 DNA-binding response regulator CP000034.1.gene3671. Protein 6e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMLG_2728 YP_005971318.1 DNA-binding response regulator VFG1563 Protein 2e-35 47
LMLG_2728 YP_005971318.1 DNA-binding response regulator VFG1702 Protein 3e-35 47
LMLG_2728 YP_005971318.1 DNA-binding response regulator VFG1389 Protein 2e-27 41