Gene Information

Name : LMKG_01500 (LMKG_01500)
Accession : YP_005967327.1
Strain : Listeria monocytogenes FSL R2-561
Genome accession: NC_017546
Putative virulence/resistance : Virulence
Product : internalin F
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 428309 - 430774 bp
Length : 2466 bp
Strand : +
Note : -

DNA sequence :
ATGAAATCTAAAAATAATTATTTCAAACAAATCACCACCATAATGACCGTCGTGAGCCTTTTAATTATGGTGTTAGGTAT
TCAAGGTAATAATGATGTTAAAGCAGCGCCACAGGTCGCGCCACCAGCATCAATTAATCAAATTTTTCCTGATGCAGATT
TAGCGGAGGGAATACGAGCGGAACTTCAAAAATCAAGTGTCACAGATGTAGTAACGAAAGAAGAATTAGAAAGCATTTCG
CAACTGTCGGTATACGCGAAAAAAATAGCTTCTATTGAAGGGCTTGAGTATTTAACCAATTTGAAATTTTTAAATCTTAA
TGGAAACCAAATTACAGATCTCAGCCCATTAAGCAATTTAACAAAACTAACGGAAATTTATATTGGTGATAATAAAATTT
CTGATATTAGTCCGCTTCAAAACCTAACTAATGTGACTGACTTATATCTAGTAGATAATGATATTAGTGATTTAAGGCCA
TTAGCTAATTTAACCCAAATGTATAGTTTGCGTTTGGGAGGTAATTCGAATATTAGTGATTTAAACCCAGTGCGAAATAT
GACGCGTTTGAATAATTTAGAAGTAACAGGGTCTATATTAAAAGATTTGACGCCGCTAGCCGATGTAACCAGCCTAACTC
GTTTAACATTGAGTGACAATCAAATTGAAGATTTAAGTCCACTAGCTGGCTTGACAAAATTGGACAATATAGCAGCATAT
TCGAATAAAATCACTGATATTACTCCTGTGACCAATTTAACAAGACTCCAGTATTTGGATTTAGGTAGTAATGAAATCAC
TGATTTAAGTCCTGTGGCTAATCTGCAAAAATTAACCTCGCTACATCTTGCAAACAACCAGATTACTAATATTAGTATGC
TTGAAGATTTAACAAATTTAACTTCGTTGGGTTTACAAAACAATAAAATTAGTGATATATCCGTTTTGAAAAATCTAACC
CATGTGACTTATTTGCAGTTGGGGTATAACCAAATAGTGGATGTGAAAATAATCGGAGGACTAACTAATTTAACAAGTTT
GCAGTTAACACAAAACCATATTACTGACATAAGTCCTTTAGCCAACTTAACCAAAATACAATACTCTGACTTCTCTAATC
AGATGATAACAAATCTAGAACGTAATTTTTCGAAGACACTCTCCGTTCCGAACAATATAACTAGCATAGATGGAACGCTA
ATTGCGCCTGAAACGATTAGCAATAATGGAACCTACGACGCACCGAACTTGAAGTGGTCTTTACCGAACTATTTACCAGA
AGTTAAATATACGTTCAGCCAAAAAATACCGATTGGGACAGGCACAAGTAATTATAGTGGCTTCATAACACAACCGTTAA
AAGAATTACTAGATTACAAAGTCACATTTAATGTAGAAGGTAATACAAGTGAAGTAGAGACTGTAACAGAAGAAAATCTC
ATTCCAGAACCTACGAGCCCAACCAAACAAGGTTATACATTTGATGGTTGGTACGACGCAGAAACAGGCGGAACAAAATG
GGACTTCACAACCGGGCAAATGCCTGCAAATGACCTCACACTATATGCCCATTTTTCCGTAAATAGCTACCAAGCAAATT
TTGATATAGACGGTGTGGTAACGAATGAAGCGGTAGTATACGATACCTTACTCAATGAACCGACCACTCCAACCAAACAA
GGCTATACATTTGATGGCTGGTATGACGCAGAAACAGGCGGTAATAAGTGGGATTTCAAAACAATGAAAATGCCCGCGAA
TGATGTTGCTTTTTATGCACATTTTACTATCAACAACTATCAAGCAAATTTTGATATAGATGGTGAGGTAAAGAATGAAA
CGATAGCATACGATACCTTACTCAATGAACCGACCACTCCAACCAAACAAGGTTATACATTTGATGGTTGGTATGACGCA
GAAACAGGCGGAACGAAGTGGGATTTCAAAACGAAGGAAATGCCCGCGAATGATGTCACTCTATATGCACATTTTACCAT
CAACAACTACCAAGCGAACTTTGATATAGATGGGGCAGTAACAGAGGAAGTAGTAAACTATGACGCGCTTATTCCTGAAC
CAACATCACCGTCCAAAACGGGATTTACTTTCGAAGGTTGGTATGACGCAGAAGTTGGCGGAACAAAATGGGATTTTAAA
ACGATGAAAATGCCTGCGAACGATATTACTTTGTACGCACATTTCAGTAAGGAAACACCAATTATTCCTAGTCCAGATGA
AGGATTAGACTCTGATTCTACCAATGGACCAATTACTATAAATGAACCGAGTGCTACTAGTACGCCATCCCAAAATAATA
ACATCACAGTAACAGCAGGGGAAAATACTACAGAACTAGCAACAGCTAAACTTCCAAAAACTGGAGATAATGCCCCGTGG
AAAACATTGTTTGCCGGGATATTACTTTCATCATCCGCGTTTTATATTTGGAGAAAAAAAGCATAA

Protein sequence :
MKSKNNYFKQITTIMTVVSLLIMVLGIQGNNDVKAAPQVAPPASINQIFPDADLAEGIRAELQKSSVTDVVTKEELESIS
QLSVYAKKIASIEGLEYLTNLKFLNLNGNQITDLSPLSNLTKLTEIYIGDNKISDISPLQNLTNVTDLYLVDNDISDLRP
LANLTQMYSLRLGGNSNISDLNPVRNMTRLNNLEVTGSILKDLTPLADVTSLTRLTLSDNQIEDLSPLAGLTKLDNIAAY
SNKITDITPVTNLTRLQYLDLGSNEITDLSPVANLQKLTSLHLANNQITNISMLEDLTNLTSLGLQNNKISDISVLKNLT
HVTYLQLGYNQIVDVKIIGGLTNLTSLQLTQNHITDISPLANLTKIQYSDFSNQMITNLERNFSKTLSVPNNITSIDGTL
IAPETISNNGTYDAPNLKWSLPNYLPEVKYTFSQKIPIGTGTSNYSGFITQPLKELLDYKVTFNVEGNTSEVETVTEENL
IPEPTSPTKQGYTFDGWYDAETGGTKWDFTTGQMPANDLTLYAHFSVNSYQANFDIDGVVTNEAVVYDTLLNEPTTPTKQ
GYTFDGWYDAETGGNKWDFKTMKMPANDVAFYAHFTINNYQANFDIDGEVKNETIAYDTLLNEPTTPTKQGYTFDGWYDA
ETGGTKWDFKTKEMPANDVTLYAHFTINNYQANFDIDGAVTEEVVNYDALIPEPTSPSKTGFTFEGWYDAEVGGTKWDFK
TMKMPANDITLYAHFSKETPIIPSPDEGLDSDSTNGPITINEPSATSTPSQNNNITVTAGENTTELATAKLPKTGDNAPW
KTLFAGILLSSSAFYIWRKKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
inlF AAB67968.1 internalin Virulence Internalin Protein 0.0 99
inlA CAC20628.1 internalin A Virulence Internalin Protein 9e-145 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMKG_01500 YP_005967327.1 internalin F VFG0075 Protein 5e-145 45