Gene Information

Name : LMKG_00127 (LMKG_00127)
Accession : YP_005969149.1
Strain : Listeria monocytogenes FSL R2-561
Genome accession: NC_017546
Putative virulence/resistance : Virulence
Product : iron compound ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2290004 - 2290783 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAGTAAGGGACGTTAATTTTAGTTATAATGGAACCGATGCAATTTTGAAAAATGTCTCATTTACTATCCAGAAAAA
TAAAATCAATACGATTGTTGGGCCAAATGGTAGTGGAAAATCTACCTTATTAGAAATTTTGGCTAGACTCCTTTCACCTA
ATTCTGGGGATGTTTTACTGGAAGGAAAATCGATTTTTGAATGGAAAGCAAAAGAATTTGCGCAAAATGTGGCGATTGTT
CATCAAAGTAATGTTCTTCCGAATGAACTAATGGTGAAGGAATTGCTTTACTTTGGTCGTCTACCTTATAAAAATTGGCG
AATGACTCGGACGAAGGAGGATGATCTAGCTGTTGAGTGGGCTTTGATGCAAACGGAGCTAACTGAAAAAGCAGAGAAAT
TTGTTGATAGTCTTTCTGGAGGAGAGCGGCAACGTGTTTTTATAGCAACAGCATTAGTTCAGGATACACCTATTTTGCTG
TTGGACGAGCCCACGACATTTCTAGACATGTATTTTCAACTAGAAATTTTAGAATTAGTGAAACGATTAAATCAAGAAGA
AAATTTGACTATTGTAATGATTTTGCATGACTTAAACCAAGCACTGATGTATAGTGACCATTTGATTGTGATGAAAAATG
GGGAAGTGGTTGCAAAAGGAGAACCAGAAGAATTACTAACAACAGATTTGATTGCTGAAACTTATGGTGTAGTTGCAGAT
GTTTTAAACGATGCGAACAACGGGAAATACATTGTTCCTCAAAGACGAAAGGAGTTTTAG

Protein sequence : 
MEVRDVNFSYNGTDAILKNVSFTIQKNKINTIVGPNGSGKSTLLEILARLLSPNSGDVLLEGKSIFEWKAKEFAQNVAIV
HQSNVLPNELMVKELLYFGRLPYKNWRMTRTKEDDLAVEWALMQTELTEKAEKFVDSLSGGERQRVFIATALVQDTPILL
LDEPTTFLDMYFQLEILELVKRLNQEENLTIVMILHDLNQALMYSDHLIVMKNGEVVAKGEPEELLTTDLIAETYGVVAD
VLNDANNGKYIVPQRRKEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-45 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-43 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-43 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-43 45
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-43 45
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-44 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 4e-45 42
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 4e-45 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-42 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMKG_00127 YP_005969149.1 iron compound ABC transporter BAC0164 Protein 1e-42 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMKG_00127 YP_005969149.1 iron compound ABC transporter VFG1042 Protein 1e-42 41
LMKG_00127 YP_005969149.1 iron compound ABC transporter VFG0925 Protein 1e-41 41