Gene Information

Name : LMKG_03123 (LMKG_03123)
Accession : YP_005967148.1
Strain : Listeria monocytogenes FSL R2-561
Genome accession: NC_017546
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 235440 - 236936 bp
Length : 1497 bp
Strand : +
Note : -

DNA sequence :
ATGAGTAACGAGAATCATGAAGAACTAAATGACCAACTCATCGTCCGTCGTGAAAAAGTGGACACATTGCGCGAAGAAGG
CATAGATCCTTTTGGCGAAAAATTCATCCGTTCCATCAGCCCGGAAGAAATCGAAACAAAATTCGCTGATAAATCAAAAG
AAGAACTTGAAGAAGCTGCTATTGAAGTTTCTGTAGCAGGTCGTATTATGACAAAGCGTGTAAAGGGTAAGGTAGGTTTC
ACACATATTCAAGACCGTTTCCATCAATTACAAATCTATATCCGTAAAGATGCGATTGGCGAAGATGCTTACGCAGTCTT
CAAATTAGCAGATCTAGGTGACATTATTGGTATAAAAGGAACTATTTTCCGTACTAATACAGGTGAACTTTCTGTTAAAG
CAACGGAATTCACTTTGCTTTCCAAATCGTTACGTCCACTTCCTGATAAATATCATGGTTTAAAAGACGTAGAACAACGC
TATCGTCAACGCTATTTAGACTTAATCACAAACGAAGAAAGTCAAAATCGCTTTGTGATGCGCAGTAAAATCTTGAAATA
CACTCGTGATTATATGGATAACCAAGGATTCTTAGAAGTAGAAACTCCGGTGCTTCATACAATTGCTGGTGGTGCTGCTG
CAAAACCATTTATCACGCACCATAATGCGCTTGATATGGAATTATACTTGCGAATCGCTTTAGAACTACACTTAAAACGT
CTAATCGTTGGTGGGATGGATAAAGTGTACGAAATTGGCCGTGTTTTCCGTAATGAAGGAACATCCACGCGTCATAACCC
AGAATTTACAATGCTAGAATCCTATGCAGCATACGAAGATTATGAAGATGTTATGGATCTGGTAGAAGGTTTAGTATCCA
CGGTATGTAAACAAGTAAATGGAACAACAGAAATAACATACGGTGAATACAAAGTAGATTTAACTCCTAACTGGCGCCGT
ATCCACATGGCAGATGCTGTAAAAGAATACGTAGGAGTGGATTTTTGGAACGTAACTTCCGATGAAGAAGCGCGTGAACT
AGCAAAAAAACATGATGTGCCAGTAACGGAACACATGACATACGGGCACATTCTTAATGAGTTTTTCGAAACATACGTAG
AAGAAAAGCTCATTCAACCAACCTTTGTTTACGGGCATCCGGTGGAAATTTCCCCATTAGCGAAGAAAAACAAAGAAGAT
GAACGTTTTACTGACCGTTTTGAATTATTTATCGTTGGTCGTGAACATGCAAATGCATTCTCAGAATTAAACGATCCAAT
TGATCAAAGAGAACGCTTTGAAGCGCAAATGAAAGAACGTGAGCAAGGTAATGATGAAGCACACGGAATGGATGCAGATT
TCCTTGAAGCTTTAGAATACGGTCTACCGCCAACTGGTGGACTTGGAATAGGTATTGATCGTCTAGTAATGCTATTAACA
GATGCCCCGTCTATTCGTGATATCCTATTATTCCCAACTATGAAACACCGCGACTAA

Protein sequence :
MSNENHEELNDQLIVRREKVDTLREEGIDPFGEKFIRSISPEEIETKFADKSKEELEEAAIEVSVAGRIMTKRVKGKVGF
THIQDRFHQLQIYIRKDAIGEDAYAVFKLADLGDIIGIKGTIFRTNTGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQR
YRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFITHHNALDMELYLRIALELHLKR
LIVGGMDKVYEIGRVFRNEGTSTRHNPEFTMLESYAAYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYKVDLTPNWRR
IHMADAVKEYVGVDFWNVTSDEEARELAKKHDVPVTEHMTYGHILNEFFETYVEEKLIQPTFVYGHPVEISPLAKKNKED
ERFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGMDADFLEALEYGLPPTGGLGIGIDRLVMLLT
DAPSIRDILLFPTMKHRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 2e-105 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMKG_03123 YP_005967148.1 lysyl-tRNA synthetase VFG1668 Protein 1e-105 48