Gene Information

Name : LMKG_00256 (LMKG_00256)
Accession : YP_005969033.1
Strain : Listeria monocytogenes FSL R2-561
Genome accession: NC_017546
Putative virulence/resistance : Virulence
Product : choloylglycine hydrolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2166747 - 2167724 bp
Length : 978 bp
Strand : -
Note : -

DNA sequence :
ATGTGTACGTCAATAACTTATACAACGAAGGATCACTATTTTGGAAGGAATTTCGATTATGAACTTTCTTACAAAGAAGT
TGTGGTTGTTACGCCGAAAAATTACCCGTTCCATTTTCGCAAGGTAGAGGATATAGAGAAGCATTATGCACTTATTGGTA
TTGCTGCTGTGATGGAAAACTACCCGTTGTATTACGATGCTACCAATGAAAAAGGCCTTAGTATGGCAGGACTCAATTTC
TCAGGAAATGCGGATTACAAGGATTTTGCAGAAGGTAAGGACAATGTGACCCCCTTTGAATTTATTCCGTGGATTCTTGG
TCAATGCGCTACTGTAAAAGAAGCAAGAAGATTACTTCAGAGAATCAATCTCGTGAATATTAGTTTTAGTGAAAATTTAC
CGCTGTCTCCATTACATTGGTTGATGGCTGATCAAACAGAATCTATTGTAGTGGAATGTGTGAAAGATGGACTTCACATT
TATGATAATCCTGTTGGCGTGTTAACAAATAATCCAACATTTGATTACCAACTATTTAATTTAAACAATTATCGCGTTCT
TTCGAGTGAAACCCCAGAAAATAATTTTTCCAAAGAGATTGATTTGGATGCTTATAGTCGTGGGATGGGCGGAATTGGCT
TACCTGGTGATTTATCTTCTATGTCTCGTTTTGTGAAAGCAACTTTTACCAAATTGAATTCTGTTTCAGGTGATTCTGAA
TCAGAAAGTATTAGCCAATTTTTCCATATTTTAGGCTCGGTGGAACAACAAAAAGGTCTTTGTGATGTTGGTGGGGGAAA
ATACGAGCATACTATTTATTCCTCGTGTTGCAATATCGATAAAGGAATTTATTATTATAGAACATACGGAAACAGTCAAA
TTACTGGTGTGGATATGCACCAAGAGGATTTAGAGAGCAAAGAACTAGCTATTTATCCACTCGTCAATGAGCAACGACTA
AACATTGTTAACAAATAA

Protein sequence :
MCTSITYTTKDHYFGRNFDYELSYKEVVVVTPKNYPFHFRKVEDIEKHYALIGIAAVMENYPLYYDATNEKGLSMAGLNF
SGNADYKDFAEGKDNVTPFEFIPWILGQCATVKEARRLLQRINLVNISFSENLPLSPLHWLMADQTESIVVECVKDGLHI
YDNPVGVLTNNPTFDYQLFNLNNYRVLSSETPENNFSKEIDLDAYSRGMGGIGLPGDLSSMSRFVKATFTKLNSVSGDSE
SESISQFFHILGSVEQQKGLCDVGGGKYEHTIYSSCCNIDKGIYYYRTYGNSQITGVDMHQEDLESKELAIYPLVNEQRL
NIVNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0521 NP_814299.1 choloylglycine hydrolase Not tested Not named Protein 3e-114 75
ef0040 AAM75246.1 EF0040 Not tested Not named Protein 2e-114 75

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMKG_00256 YP_005969033.1 choloylglycine hydrolase VFG2162 Protein 2e-146 100