|
Name : LMKG_00358 (LMKG_00358) Accession : YP_005968938.1 Strain : Listeria monocytogenes FSL R2-561 Genome accession: NC_017546 Putative virulence/resistance : Virulence Product : PTS system ascorbate-specific transporter subunit IIC Function : - COG functional category : - COG ID : - EC number : - Position : 2064781 - 2066049 bp Length : 1269 bp Strand : - Note : - DNA sequence : ATGCTTACTTTCATCACAGAAATTTTTTCTACGCCAGCTTTTATTTTAGGAATTATAGCCGCTATTGGGTTAATTGCCTT AAGGAAAACCGGTTCTGATATTGTAAAAGGAACATTAAAAACGATTTTTGGTTTTATTATGCTACAACAGGGATCCGCGA TTATTGTTGGAAGTTTAATTCCATTTAGCACAATGTTTGAAAATGCTTTTCAACTTAAAGGGGTGGTTGCAGAAGATAAT GCTATTGCAGCTGCTGTCCAGCAAATTTTAGGAACGGAAACGTCTTTAATTCTTGTATTTGGTTTTATTATTAATGTTAT TCTTGCTAGAACAACCAGATGGAAATATATTTTCTTAACAGGGCATATGATGTTTTCCTTCGCAGCTACAATGGCCATAG TATTCGATCAAATGGGCTTTAATAGCTGGCAAATTATTTTGTTTGGTTCTATCGCACAGGGTATTTCGAGTATTGTTTTT CCAGCACTCGCACAACCTTTTGTACGCAAAGTGACAGGAAATGATCAAGTCGGTTTTGGCTTTTGGGGCAGTTCCCTTGT CTGGGCGACCGGTTGGCTTGGAGGGAAATTAGGAAATAAAGCTAATTCTACAGAAGACTTAAAAGTACCTAAAAAACTAG ATTTTTTGAAAGAAATGTCTGTTTTAATGGGGATTGTTATGGCAGTGATTTATATATTTACTTCTTTCTTTGTGGATGAA CCGGTGATGAAAGAATTAGCTGGCACACAAAGTAATGTATTATTCGCAATATTGCAATCATTCACTTTTGTTGTCGGAAT ATTGATACTACTTCAAGGGGTCCGGATGTTTTTAGGTGAATTAGTTCCAGCGTTTAAAGGTATTAGCGAGAAAATTGTTC CCGGCGCAATTCCAGCTCTTGATGTTCCCGTTTTCTATTCATTCGCACCTACTGCAACGACCATTGGTTTTTTATGCGCA GTAGTTGGAGGGCTTGGAGCGACACTAGTTTCTACCATGCTTCCCGTTGTCGTACTTCCGTCTGTTATCGGATTGTTTTT TATGGGCGGAGCGGCTGGTGTATTTGGAAATGCAATGGGTGGTAGACGAGGAGCCATTATTGCTGGTTTATTATTAGGAT TTATTTTTCAAATGATTGTAGCAATTGCTTATCCAATTTTAGGATTAGATGGTTATGGCATTCAAGGATTATGGTTTGCT TCGACGGATGCAATCATTGTTATCGTCATTATTCGATTAATTGGAGCATTATTTGGAATAGCACTTTAA Protein sequence : MLTFITEIFSTPAFILGIIAAIGLIALRKTGSDIVKGTLKTIFGFIMLQQGSAIIVGSLIPFSTMFENAFQLKGVVAEDN AIAAAVQQILGTETSLILVFGFIINVILARTTRWKYIFLTGHMMFSFAATMAIVFDQMGFNSWQIILFGSIAQGISSIVF PALAQPFVRKVTGNDQVGFGFWGSSLVWATGWLGGKLGNKANSTEDLKVPKKLDFLKEMSVLMGIVMAVIYIFTSFFVDE PVMKELAGTQSNVLFAILQSFTFVVGILILLQGVRMFLGELVPAFKGISEKIVPGAIPALDVPVFYSFAPTATTIGFLCA VVGGLGATLVSTMLPVVVLPSVIGLFFMGGAAGVFGNAMGGRRGAIIAGLLLGFIFQMIVAIAYPILGLDGYGIQGLWFA STDAIIVIVIIRLIGALFGIAL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 2e-64 | 43 |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 1e-64 | 43 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 1e-64 | 43 |
