Gene Information

Name : LMOG_02438 (LMOG_02438)
Accession : YP_005966427.1
Strain : Listeria monocytogenes J0161
Genome accession: NC_017545
Putative virulence/resistance : Virulence
Product : iron compound ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2507551 - 2508342 bp
Length : 792 bp
Strand : -
Note : -

DNA sequence : 
ATGAAATCAGCATTAGAACTAAAAAATGTTTCTTTCTCGCGTAAAAGAGATTTTGAAATGAAAAACGTGAGCGCACGCAT
TCCAGAAGGTAAAATCACTACACTTATCGGTCCAAATGGCTCGGGGAAATCAACTATGTTGCGTTTGATGATGCGTCTTT
TGACACCGGATAGCGGAGAGATTCTCTTAAATGAAAAAAATATTACTGAAATCCCATCTAAAGATTTAGCGAAGAAAATG
ACGATGTTATCACAGGCCCCAGAAGGTTTGGTAGATGTGATGGTACATGATTTAGTGGCGTATGGCCGCTTGCCGCACCG
AAGCTGGCTCTCCACTTTGCAAGAAGAGGATGAGGCGGTCATTCACTGGGCTATTAAAGTATGCAATTTAGAAGAATTGG
CTTATCGCCCACTGCATTCGTTATCAGGCGGGGAACGACAACGCGCTTGGCTCGCCATGGCTCTTGCACAAAAAACACCT
ATTTTATTACTAGATGAGCCCACGACTTATTTAGATATTGCGCATCAACTGGAGCTTTTAGATTTACTCGTGCATTTAAA
TAAAGAATATAATTTAACCATCGTGCTCGTTTTACATGATTTAAATCAGGCAGCAATATACAGTGACCATGTTTTTGTAT
GCGAAAATGGACAATTAGTCAAAGACGGCTCGCCTAGAGAAGTTTTCACGACAGAGCTTCTTCGCGATGTTTTTCATATT
ACGGCGGATATTACCGAAAAAGACGGAAAGCAGCATATTCATCCACTTGCTTCGACTCGTTTTGAATATTAA

Protein sequence : 
MKSALELKNVSFSRKRDFEMKNVSARIPEGKITTLIGPNGSGKSTMLRLMMRLLTPDSGEILLNEKNITEIPSKDLAKKM
TMLSQAPEGLVDVMVHDLVAYGRLPHRSWLSTLQEEDEAVIHWAIKVCNLEELAYRPLHSLSGGERQRAWLAMALAQKTP
ILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDHVFVCENGQLVKDGSPREVFTTELLRDVFHI
TADITEKDGKQHIHPLASTRFEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-38 48
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-43 48
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-43 48
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-43 48
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-43 48
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 8e-38 47
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-39 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-39 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOG_02438 YP_005966427.1 iron compound ABC transporter ATP-binding protein BAC0164 Protein 7e-39 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOG_02438 YP_005966427.1 iron compound ABC transporter ATP-binding protein VFG1042 Protein 6e-39 48
LMOG_02438 YP_005966427.1 iron compound ABC transporter ATP-binding protein VFG0925 Protein 3e-34 43