Gene Information

Name : LMOG_01276 (LMOG_01276)
Accession : YP_005965944.1
Strain : Listeria monocytogenes J0161
Genome accession: NC_017545
Putative virulence/resistance : Virulence
Product : iron(3+)-hydroxamate import ATP-binding protein fhuC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2033377 - 2034201 bp
Length : 825 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAGACCTTCATACAGATAACTTACAAATTTCATACGACAAACGAATCATTGTTGATGGTTTAGACATAGCCATTCC
AGCGAATAAAATAACCGCTTTAGTAGGTGCAAATGGTTCAGGGAAATCGACTATTTTAAAAACGATGTCCCGCTTAATGA
AACCTAGTAAAGGCGCTGTTTATTTAGACGGCAAAACGATTCATAGTCAGCCAACTAGAGACGTTGCCAAACAATTAGCT
ATTTTACCACAAAACCCTTCTGCACCTGATGGTTTGACGGTGTTTGAATTAATTTCTTATGGACGTTCTCCGCATCAAAG
TAGCTTTAAATCGATTACCGCAAAAGATCGCGAAATTATTTTTTGGTCATTGCGCGTGACGAATTTAACGGAGTTCGCGG
ATCGACCTATCGATAGTTTATCAGGCGGACAACGACAGCGTGCTTGGATTGCCATGGCGCTTGCCCAAGAAACAGATGTC
CTATTTCTTGATGAGCCGACTACCTTTTTAGATATGACACACCAACTAGATGTACTTAATTTATTGAAACAATTAAATCA
ATCAGAGAACCGCACAATCGTGATGGTTGTCCATGATTTAAATCACGCATCTCGTTACGCTCACCATATGATTGCTATTA
AAGAAGGAAAAGTCATTGCAGAAGGAACACCAACAAGCGTCATGACCGAACAAACTTTAGAGGATGTCTTTAATATCAAA
GCAGATATTTTAATTGACCCCCGCAGCGGTGTCCCTCTTTGCCTTCCATACGAAACTTGCAACGGATGCGAAATTGTAAA
GGAGCTTGATTCCATTGCCAAATGA

Protein sequence : 
MKDLHTDNLQISYDKRIIVDGLDIAIPANKITALVGANGSGKSTILKTMSRLMKPSKGAVYLDGKTIHSQPTRDVAKQLA
ILPQNPSAPDGLTVFELISYGRSPHQSSFKSITAKDREIIFWSLRVTNLTEFADRPIDSLSGGQRQRAWIAMALAQETDV
LFLDEPTTFLDMTHQLDVLNLLKQLNQSENRTIVMVVHDLNHASRYAHHMIAIKEGKVIAEGTPTSVMTEQTLEDVFNIK
ADILIDPRSGVPLCLPYETCNGCEIVKELDSIAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-58 49
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-58 49
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-54 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-52 44
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-56 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-50 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 7e-50 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 7e-50 43
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 7e-50 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-51 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOG_01276 YP_005965944.1 iron(3+)-hydroxamate import ATP-binding protein fhuC BAC0164 Protein 9e-53 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOG_01276 YP_005965944.1 iron(3+)-hydroxamate import ATP-binding protein fhuC VFG0925 Protein 7e-57 45
LMOG_01276 YP_005965944.1 iron(3+)-hydroxamate import ATP-binding protein fhuC VFG1042 Protein 9e-53 44