Gene Information

Name : LMOG_03072 (LMOG_03072)
Accession : YP_005964153.1
Strain : Listeria monocytogenes J0161
Genome accession: NC_017545
Putative virulence/resistance : Unknown
Product : glucan 1,6-alpha-glucosidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 191415 - 193076 bp
Length : 1662 bp
Strand : +
Note : -

DNA sequence :
ATGAAAGAAAAAGACTGGTGGAAAAAAAGCGTAGTGTACCAAATCTATCCAAAAAGTTTTAATGATTCGAATGGCGATGG
AGTCGGTGATATTCAAGGAATTATCGAGAAATTAGATTATTTAAAAGAGCTTGGCGTGGACGTTATCTGGTTGTCCCCTG
TATACGATTCGCCACAAGACGACAATGGTTACGATATTCGTGATTATCAAAAAATTTACGAAGAATATGGCGACATGGCG
ACTTTTGATCAGTTACTTCAAGGTTTACACGACCGCGATATGAAACTCGTAATGGACTTAGTTGTAAACCATACTTCTGA
TGAACATAAGTGGTTTGAAGAATCTCGGAAATCCAAAGATAACCCATATCGCGATTACTATTTCTGGCGCGAGGAAAACG
AAATCAACAACTGGGGTTCCATTTTCAGCGGTCCGGCATGGGAATTAGACGAAAAAACAGGCGAGTACTATTTACACCTG
TTCTCCAAAAAACAACCTGATTTAAACTGGGAAAACCCTAAATTACGCCAAGATGTATATAATATGATGAAATTCTGGCT
AGATAAAGGCATTGATGGTTTCCGCATGGACGTAATTAATTTTATTTCCAAAAACACCGATTTCCCAGATGGTCCAGTGC
CAGATGGTCAAATTTACGGCGATGCTGGCAATGATTTCTGCAATGGACCGCGGATTCATGAGTTCTTGCAAGAAATGAAC
CAAGAAGTTACTTCCAAATACGATGTGATGACTGTTGGTGAAATGCCTGGTGCTAGTACAACTGACGCGCAGATTTATAC
GAATCCAGCAAATAACGAAGTCGATATGATTTTTACATTTGAACATATGAACTTAGATTCCGATGGCGACAATAAATGGG
ATTTGAAACCAATTTACTTACCAGATTTAAAAGAAAACATGTCCGAATGGCAAGTGGCGCTTCAAGAAAATGGCTGGAAC
AGCTTATACTGGAACAATCATGACCAACCACGAATCGTTTCTCGCTTCGGAAATGACAATCGTTTCCGCGTTCGTTCAGC
GAAAATGCTCGCAACTTGTCTGCATATGATGAAAGGAACGCCGTACATTTATCAAGGTGAAGAAATCGGGATGACGAATG
TTCATTTTGAAACGCTAGATGATTATCGTGATATCGAAACGCTAAACATGTACAAAGAACGCAAAGAGCAAGGCCACAGT
CACGAAAGCATCATGCAGTCGATTTACACAAAAGGTCGCGACAATGCGAGAACCCCTTATCAGTGGGATAATAGCGAGAA
TGCTGGCTTCACAACCGGAACGCCTTGGCTTAAAGTCAACCCGCGCTATACAGAAATCAACAACGAAGAAGCGCTGAAAA
ACCCTGATTCCATTTTCTACTACTACCAAAATCTTATTAAGTTACGAAAAACGACTGAAATCATCACAACCGGTAATTAT
CGCCTGTTATTACCTAAAGACGAAGCGATTTTCGCATATGAACGCTACACAGAAAATGAAAAATTAGTTGTTTTATGTAA
TTTCACAGAAGAAGAACAAGTTATTTTTGATGAAAACATTTTGAACGAACTCCAAAAAGGTTCCGTGCTTGTAAACAATG
TTCCAAATATTATAGAAGGAACTTTACGACCTTACGAAGCAATCGTTTATCAAATCAAGTAA

Protein sequence :
MKEKDWWKKSVVYQIYPKSFNDSNGDGVGDIQGIIEKLDYLKELGVDVIWLSPVYDSPQDDNGYDIRDYQKIYEEYGDMA
TFDQLLQGLHDRDMKLVMDLVVNHTSDEHKWFEESRKSKDNPYRDYYFWREENEINNWGSIFSGPAWELDEKTGEYYLHL
FSKKQPDLNWENPKLRQDVYNMMKFWLDKGIDGFRMDVINFISKNTDFPDGPVPDGQIYGDAGNDFCNGPRIHEFLQEMN
QEVTSKYDVMTVGEMPGASTTDAQIYTNPANNEVDMIFTFEHMNLDSDGDNKWDLKPIYLPDLKENMSEWQVALQENGWN
SLYWNNHDQPRIVSRFGNDNRFRVRSAKMLATCLHMMKGTPYIYQGEEIGMTNVHFETLDDYRDIETLNMYKERKEQGHS
HESIMQSIYTKGRDNARTPYQWDNSENAGFTTGTPWLKVNPRYTEINNEEALKNPDSIFYYYQNLIKLRKTTEIITTGNY
RLLLPKDEAIFAYERYTENEKLVVLCNFTEEEQVIFDENILNELQKGSVLVNNVPNIIEGTLRPYEAIVYQIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 6e-150 56