Gene Information

Name : LMOG_00413 (LMOG_00413)
Accession : YP_005965284.1
Strain : Listeria monocytogenes J0161
Genome accession: NC_017545
Putative virulence/resistance : Resistance
Product : arsenic efflux pump protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1328762 - 1330057 bp
Length : 1296 bp
Strand : +
Note : -

DNA sequence : 
ATGCAGATTACTTTAGCTATTTTAGTATTTGTCCTAACGCTGTTTTTCGTAATTTGGCAGCCAAGAAAATTATCGATTGG
ATGGTCAGCTTGTGGCGGAGCGTTAATCGCATTATTACTTGGTGTTGTCACCTTAGCTGATGTTATGACAGTTACAGGGA
TTGTATGGAATGCGACACTTGCTTTTATTGCGATTATAATCATTTCACTCATTTTAGATGAAATTGGATTTTTTGAGTGG
GCGGCCCTACATATGGCACGTTTAGCAAGAGGGAATGGATTATTAATGTTTATTCTTATTTCTATTTTGGGTGCTCTTGT
CGCGGCACTGTTTGCTAATGACGGAGCGGCATTGATTCTGACGCCAATTGTTTTAGCAATGGTGCGAGCGCTGGATTTTG
ATGAGAAAAAGGTGTTTCCATTTATTATAGCTAGTGGATTTATAGCGGATACAACATCCTTGCCACTTGTAGTTAGTAAT
TTAGTTAATATTGTTTCAGCTGATTTTTTTGGCATTAGTTTTTCACGGTATGCACTCATTATGTGGATCCCTACTATTTT
TTCATTAGTTGCAAGTATTATCATTTTATATATCTATTTCCGAAAAGCTTTACCGAGAAAATACGATGTAAATGCGATTC
AAAAGCCAGCTTCAGCACTTAAAGATAGGAAGATGTTTCATATTTCTTGGGGAATCCTTACTATTCTTGTAGTAGGCTAT
TTTTTAAGTAGTTTTTTAGATATACCAGTGTCGTTTATTGCTTTACTAGTCGCTCTAATTTTCTTGTTAGTTGGTGCAAA
AAGCCACTCTGTTTCAACAAAAGCTATTCTAAAAGGAGCACCTTGGAGCATTGTTTTTTTCTCAGTTGGTATGTATGTGG
TTGTGTATGGCTTGCAAAATGTTGGAATCACCAAACTATTATCAGAAGCTATTACCTATGTCGCGCACTTTGGTTTATTT
GCCGGAACAATCGGAATGGGTTTCATTGCTGCGATACTATCGTCTGTCATGAATAATTTGCCTACCGTGATGATAAATGC
GCTAGCAATCGATCATACTTCATTTACCGGAGTAATGAAAGAGGCGCTAGTATATGCAAATGTTATTGGTTCGGATCTAG
GACCTAAAATAACACCCATTGGCTCGCTCGCAACTTTACTTTGGTTACATGTGTTAGCTCAGAAAGGCATAAAGATAAGT
TGGGCGTCATACTTCAAAATTGGTATTGTCATTACTATTCCTGTTTTGTTCATTACGCTCGTAGGCTTATACGTATCATT
ACTTATTTGGAACTAA

Protein sequence : 
MQITLAILVFVLTLFFVIWQPRKLSIGWSACGGALIALLLGVVTLADVMTVTGIVWNATLAFIAIIIISLILDEIGFFEW
AALHMARLARGNGLLMFILISILGALVAALFANDGAALILTPIVLAMVRALDFDEKKVFPFIIASGFIADTTSLPLVVSN
LVNIVSADFFGISFSRYALIMWIPTIFSLVASIIILYIYFRKALPRKYDVNAIQKPASALKDRKMFHISWGILTILVVGY
FLSSFLDIPVSFIALLVALIFLLVGAKSHSVSTKAILKGAPWSIVFFSVGMYVVVYGLQNVGITKLLSEAITYVAHFGLF
AGTIGMGFIAAILSSVMNNLPTVMINALAIDHTSFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVLAQKGIKIS
WASYFKIGIVITIPVLFITLVGLYVSLLIWN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 4e-122 67
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 2e-116 65
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 5e-116 64
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 4e-95 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMOG_00413 YP_005965284.1 arsenic efflux pump protein BAC0574 Protein 1e-118 65
LMOG_00413 YP_005965284.1 arsenic efflux pump protein BAC0575 Protein 6e-118 65
LMOG_00413 YP_005965284.1 arsenic efflux pump protein BAC0578 Protein 6e-95 58
LMOG_00413 YP_005965284.1 arsenic efflux pump protein BAC0577 Protein 2e-96 58
LMOG_00413 YP_005965284.1 arsenic efflux pump protein BAC0576 Protein 5e-95 58
LMOG_00413 YP_005965284.1 arsenic efflux pump protein BAC0031 Protein 2e-92 57