|
Name : LMRG_02097 (LMRG_02097) Accession : YP_005962128.1 Strain : Listeria monocytogenes 10403S Genome accession: NC_017544 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpE Function : - COG functional category : - COG ID : - EC number : - Position : 1008672 - 1010846 bp Length : 2175 bp Strand : - Note : - DNA sequence : ATGAACTGTGAAAAATGTAATCAAAATCCAGCAACAATCCAACTATATATGAATATTAATGGCAAGCGTGTGGAAATGCC GCTTTGTGCCTCTTGTTATGCAGAAGTTAGAAATCAAGCAAACTTTGGGTCGAATGAGTTCCCAGGAGCAAGTGGCTCCC CGTTTGACGATATTTTTCGTCAATTGAGTGGTGCTGCAAACCAAGCAAACCGTGAACAAAGAAGCCAAGCTAATGCACAA GTACAAACACAAACTGCTGGCGGTGGTAATGGCATATTAGATGAATTTGGGACTAACTTAACAGATATGGCGAAAAACGA GCAACTCGACCCTGTCATTGGCCGTGATAAAGAAATTAAGCGTGTCATTGAAATATTGAACCGCCGTAATAAAAATAATC CAGTCCTAATCGGTGAACCAGGTGTTGGTAAAACTGCCGTCGTAGAAGGACTTGCAAATGCAATTGTCGCAGGAGACGTT CCAAGCAAACTAATGAACAAAGAAGTTATCTTACTTGATGTCGCTTCGCTTGTTTCCGGAACAGGTATCCGCGGTCAATT TGAAGAACGCATGAAACAACTAATTAAAGAACTTCAAGAACGTAAAAACACGATTCTCTTCATTGATGAAGTGCATACTA TCGTTGGGGCAGGTTCCGCAGAAGGGTCAATGGATGCAGGAAACATTCTAAAACCAGCTTTAGCTCGCGGCGATTTGCAA ATGATTGGTGCTACTACGCTAAAAGAATACCGCACAATCGAAAAAGATGCCGCACTTGAACGACGCTTCCAACCAGTAAC TGTAAGCGAACCATCCACAAAAGAAACGCTAACTATTTTAAATGGTTTAAAACCAAAATATGAAGATTTCCATGAAGTAG TTTATTCACCTGAAGCATTAACAGCAGCAGTTGAATTAAGCGCTCGTTATATCCAAGATCGTCATTTGCCAGACAAAGCA ATTGATTTAATGGATGAAGTTGGCTCAAAATATAATCTATCCATTGAAAAACTAGACGAAAATACGGTAAGCGAACGTGT TGCCCGTTTAGAAGATGAAAAAAATCAAGCTCTTCAAATGGAAGACTACGAAAAGGCAGCCAAAGTTCGTGACGAAATTA CTCGCTTAGAAGAAAATAAAACAAGCAATTCCTTCTCAGAACGCCCTGTTATTCAAGCATCAGACATACAAGCGATTATT GAAGAAAAAACAGGCATTCCTGTAGGACGCTTACAAGAAGACGAGCAATCCAAAATGAAAAACTTAGAACGTAACTTAAC TGGAAAAGTAATTGGTCAAGAAGATGCCGTGAAAAAAGTAGCTAAAGCAATTCGTCGTAGCCGTGTTGGCCTCAAATCAA AAAATCGCCCAATTGGTTCCTTCCTATTTGTTGGACCAACTGGTGTCGGAAAAACAGAACTTGGTCGTACGCTAGCTCGT GAATTGTTCGGTACTACTGAAGCAATGATTCGTTTAGATATGAGTGAATTCATGGAAAAACACAGCGTCTCTAAACTAAT CGGTTCTCCTCCAGGCTATGTTGGTCACGAAGAAGCTGGGCAATTAACAGAAAAAGTTCGTCGCAATCCGTATAGCATCA TTTTGTTAGACGAAATCGAAAAAGCACATCCAGACGTTCAACATATGTTTCTACAAATTTTAGAAGATGGTCGACTAACT GATTCACAAGGGCGTACAGTAAGCTTTAAAGATACAGTCATCATTATGACAAGTAATGCTGGTGCGACAGATACAGAGGC TTCTGTCGGCTTTAATACAACAACAGAAACTAAACTTGAAAAAGGCTCTGACATCCTTGCGAAATTAGGCGCATACTTCA AACCAGAATTCTTAAACCGTCTTGATAGCGTCATTGAATTTAAATCACTAGAAAAAGACGATTTAGTACAAATTATTGAT TTAATGCTCATTGACTTAAATGAAATGCTCGCTCAAGAAGGCGTGACAATCGATGTTTCCAAGGAAGTAAAAGAACATTT GATTGATCTTGGTTATGATCCTAAATTTGGAGCACGGCCACTACGCCGGACTATCCAAGAGCACCTGGAAGATACTATTG CTGACAGTTTAATTGATCAACCAGAAGCGAAAAATCTCGTTGCAACTCTAAACGATAACAAAGAAATCACCATAACAGAA CAAGTAACAGCGTAA Protein sequence : MNCEKCNQNPATIQLYMNINGKRVEMPLCASCYAEVRNQANFGSNEFPGASGSPFDDIFRQLSGAANQANREQRSQANAQ VQTQTAGGGNGILDEFGTNLTDMAKNEQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIVAGDV PSKLMNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSAEGSMDAGNILKPALARGDLQ MIGATTLKEYRTIEKDAALERRFQPVTVSEPSTKETLTILNGLKPKYEDFHEVVYSPEALTAAVELSARYIQDRHLPDKA IDLMDEVGSKYNLSIEKLDENTVSERVARLEDEKNQALQMEDYEKAAKVRDEITRLEENKTSNSFSERPVIQASDIQAII EEKTGIPVGRLQEDEQSKMKNLERNLTGKVIGQEDAVKKVAKAIRRSRVGLKSKNRPIGSFLFVGPTGVGKTELGRTLAR ELFGTTEAMIRLDMSEFMEKHSVSKLIGSPPGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLT DSQGRTVSFKDTVIIMTSNAGATDTEASVGFNTTTETKLEKGSDILAKLGAYFKPEFLNRLDSVIEFKSLEKDDLVQIID LMLIDLNEMLAQEGVTIDVSKEVKEHLIDLGYDPKFGARPLRRTIQEHLEDTIADSLIDQPEAKNLVATLNDNKEITITE QVTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 2e-155 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| LMRG_02097 | YP_005962128.1 | ATP-dependent Clp protease ATP-binding subunit ClpE | VFG0080 | Protein | 0.0 | 99 |
| LMRG_02097 | YP_005962128.1 | ATP-dependent Clp protease ATP-binding subunit ClpE | VFG0079 | Protein | 7e-161 | 52 |
