|
Name : LMRG_02611 (LMRG_02611) Accession : YP_005961404.1 Strain : Listeria monocytogenes 10403S Genome accession: NC_017544 Putative virulence/resistance : Unknown Product : succinyl-diaminopimelate desuccinylase Function : - COG functional category : - COG ID : - EC number : - Position : 281675 - 282814 bp Length : 1140 bp Strand : + Note : - DNA sequence : ATGGACCAACAAAAAAAGATTCAAATTTTAAAGGACATGGTAAATATTGATTCGACTAATGGGCATGAAGAACAAGTTGC GAACTATTTGCAAAAGTTGTTAGCTGAACACGGTATTGAGTCCGAAAAGGTACAATACGACGTAGACAGAGCTAGCCTAG TAAGCGAAATTGGTTCCAGTAACGAGAAGGTTTTGGCATTTTCAGGGCATATGGATGTAGTTGATGCGGGTGATGTATCT AAGTGGAAGTTCCCACCTTTTGAAGCGACAGAGCATGAAGGGAAACTATACGGACGCGGCGCAACGGATATGAAGTCAGG TCTAGCGGCGATGGTTATTGCAATGATTGAACTTCATGAAGAAAAACAAAAACTAAACGGCAAGATCAGATTATTAGCAA CAGTTGGGGAAGAAATCGGTGAACTTGGAGCAGAACAACTAACACAAAAAGGTTACGCAGATGATTTAGATGGTTTAATC ATCGGTGAACCGAGCGGACACAGAATCGTTTATGCGCATAAAGGTTCCATTAATTATACCGTTAAATCCACTGGTAAAAA TGCCCATAGTTCGATGCCAGAGTATGGTGTGAATGCAATTGATAATTTGATACTATTTTACAATGAAATAGAAAAATACG TTGCTTCCATCCATGCCACAAATGAAATACTTGGCGATTTTATTCATAATGTCACGGTGATTAATGGCGGAAATCAAGTC AATAGTATTCCGGAAAAAGCAGAACTACAAGGTAATATTCGTTCCATACCAGAAGTTGATAACGAGACTTTGAAGCGACG TATTGTTGAAATTGTGAATGAGTTAAATAAAAAAGAACATGTGAAGTTAGAGTTACTGTTCGATTATGATAAACAGCCTG TATTTAGCGATAGGAATTCAAGCTTAGTGAATGTCGCACGTGATGTTGCGAAAGGTATTATTAAAGAAGAGATACCCTTA CTTGGAATTTCTGGAACAACAGATGCAGCTGAATTTACCAAAGCGAAGAAACAATTCCCAGTGATTATTTTTGGACCAGG AAACGAAACCCCTCACCAAGTAAACGAAAATGTTTCAATTGACAATTATTTAGAAATGATTGATGTATACAAACGGATTG CCATTGAGTATTTATCGTGA Protein sequence : MDQQKKIQILKDMVNIDSTNGHEEQVANYLQKLLAEHGIESEKVQYDVDRASLVSEIGSSNEKVLAFSGHMDVVDAGDVS KWKFPPFEATEHEGKLYGRGATDMKSGLAAMVIAMIELHEEKQKLNGKIRLLATVGEEIGELGAEQLTQKGYADDLDGLI IGEPSGHRIVYAHKGSINYTVKSTGKNAHSSMPEYGVNAIDNLILFYNEIEKYVASIHATNEILGDFIHNVTVINGGNQV NSIPEKAELQGNIRSIPEVDNETLKRRIVEIVNELNKKEHVKLELLFDYDKQPVFSDRNSSLVNVARDVAKGIIKEEIPL LGISGTTDAAEFTKAKKQFPVIIFGPGNETPHQVNENVSIDNYLEMIDVYKRIAIEYLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dapE | CAA07459.1 | succinyl-diaminopimelate desuccinylase | Not tested | Internalin | Protein | 2e-164 | 91 |
| unnamed | CAC20637.1 | - | Not tested | Internalin | Protein | 9e-163 | 90 |
