Gene Information

Name : LMRG_02623 (LMRG_02623)
Accession : YP_005961343.1
Strain : Listeria monocytogenes 10403S
Genome accession: NC_017544
Putative virulence/resistance : Virulence
Product : 1-phosphatidylinositol phosphodiesterase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 199083 - 200036 bp
Length : 954 bp
Strand : -
Note : -

DNA sequence : 
TTGTATAAGATTTATTTACGACGCACATTAGTTTTAGTACTCTGTTTTATTTTATGCTTTTTTACTTTCCCATTAGGCGG
GAAAGCATATTCGCTTAATAACTGGAATAAGCCAATAAAGAACTCTGTAACTACAAAACAATGGATGTCCGCTCTACCTG
ACACAACAAACCTAGCAGCGCTCTCTATACCAGGTACACACGATACGATGAGCTATAACGGAGACATGACGTGGACATTA
ACCAAACCACTGGCTCAAACGCAAACGATGTCATTGTATCAACAATTAGAAGCAGGAATACGGTACATCGATATTAGAGC
AAAGGACAATCTCAAAATTTACCATGGGCCAATTTATTTAAATGCATCACTTTCAGGTGTATTAGAAACGATTACTCAAT
TTTTAAAGAAAAATCCAAAAGAAACCATTATTATGCGTTTAAAAGACGAGCAAAACAGCAACGATAGTTTTGATTATCGG
ATCCAACCACTAATCAACATTTATAAAGATTATTTTTACACTACTCCCAGAACTGACACGAGCAATAAAATCCCTACATT
AAAAGATGTCCGCGGAAAAATATTATTACTTTCAGAGAACCACACAAAAAAGCCATTAGTCATTAACTCACGCAAATTCG
GCATGCAGTTCGGCGCACCTAACCAAGTAATTCAAGATGACTACAATGGTCCGAGTGTGAAAACAAAATTCAAAGAGATT
GTCCAGACTGCTTATCAAGCTTCCAAAGCGGACAATAAACTTTTTCTTAACCATATTAGCGCCACTTCATTAACATTCAC
ACCTCGTCAGTATGCTGCAGCATTAAACAACAAAGTAGAGCAATTCGTACTCAACTTAACATCGGAAAAAGTTCGAGGAT
TAGGCATACTAATCATGGACTTCCCCGAAAAACAAACAATTAAAAACATCATAAAAAACAATAAATTCAACTAA

Protein sequence : 
MYKIYLRRTLVLVLCFILCFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTNLAALSIPGTHDTMSYNGDMTWTL
TKPLAQTQTMSLYQQLEAGIRYIDIRAKDNLKIYHGPIYLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYR
IQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSRKFGMQFGAPNQVIQDDYNGPSVKTKFKEI
VQTAYQASKADNKLFLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
plc AAA69526.1 phosphotidyl inositol-specific phospholipase C Virulence LIPI-1 Protein 3e-129 99
plcA CAA51230.1 1-phosphatidylinositol phosphodiesterase Virulence LIPI-1 Protein 6e-95 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
LMRG_02623 YP_005961343.1 1-phosphatidylinositol phosphodiesterase VFG0073 Protein 5e-129 98